Cyprinodon variegatus (sheepshead minnow): 107101357
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Entry
107101357 CDS
T06110
Name
(RefSeq) iroquois-class homeodomain protein irx-4-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107101357
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
107101357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
107101357
NCBI-ProteinID:
XP_015255731
Ensembl:
ENSCVAG00000009870
UniProt:
A0A3Q2GGD8
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSISDTGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYTGGQGYGNYVTYGTDASAFYSLGTFDTKDAAASAHAGITQATA
YYPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDEDEEGSQEGQIKSENTDDDS
RSRADKELQLSDLDDFDALESESSECEMKHRYHMNAHMSTTTNCSAEHLVKNAPLKISAP
VSLDGEQDLGKTCLKTSPEDFQPESIQQGKSCYSQQQQGHQLLDGKPRIWSLAQTATSLN
QTEYPSCMLRCQAPPSSLTPSPAATSPVTGLDNRQDSPVTTLRNWVDGVFHDPLFRHSTL
SQALTNTTVSWTTNTKGSVLDAERSASALHQHQDPPKDSVMSFPKTINKLFCS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccatactcgtctgctccacaattcctgatgacaacc
aactctctaaccacttgctgcgagtccacgggtagatccatatccgacaccggggtagca
gcgtccggacagacaccggtctactgtccggtgtatgagagcagactgctggccacggcg
aggcatgaactgagctcagccgccgcgctgggtgtgtacggcagcccttacaccggcggt
cagggctatggaaattacgttacatacggcacagacgcatcggctttctactccctgggt
acatttgatacaaaagatgctgcagcttctgcgcatgcgggtatcacccaagcaactgcc
tactacccatatgatcctaccttgggacagtatcagtatgacagatatggttccatggat
ggaggcacaaggcgaaagaacgctactcgtgagacaaccagtaccttaaaggcctggctg
caagagcacagaaagaacccgtacccgaccaaaggggagaagatcatgctggccatcatc
accaagatgaccttgacacaggtctccacctggtttgcaaacgcccggaggagactgaag
aaggagaacaagatgacgtggccgcccagaaacaagggctcagaggagaagagatatgac
gaagatgaggaggggtctcaggaggggcagataaaaagcgagaatacagatgatgactcc
agaagtcgagctgataaggaactccagctgagcgacctggatgattttgacgcgcttgag
tctgaaagctctgagtgtgagatgaagcatcgataccacatgaacgcgcacatgtcaacg
acaaccaattgctctgccgagcacctggtgaaaaacgcgcctctgaagatctctgccccc
gtttctctggatggagagcaggacttagggaaaacctgtctgaaaacgagcccggaggac
ttccagccggagagcatacagcagggaaagtcgtgctacagccagcagcaacagggtcac
caattattagacggcaaacccaggatctggtctttggcacagaccgcgacgtccctaaac
cagactgagtatccgtcctgcatgttgaggtgccaggcgcctccctcgtccctcacgccg
tcccccgctgccacctcacccgttaccggactggacaaccgacaggactcgcccgtcacc
acgctaagaaactgggtggatggggttttccacgatcccctgttcaggcacagcacgttg
agccaggctctgaccaacaccaccgtctcctggaccaccaacaccaaaggcagcgtcctg
gatgcggagaggagcgcctcggccttgcatcagcaccaagacccgcctaaagacagtgtc
atgagtttcccaaaaactatcaacaaacttttttgctcctaa
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