Cyprinodon variegatus (sheepshead minnow): 107101361
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Entry
107101361 CDS
T06110
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
cvg04514
Cell adhesion molecules
cvg04672
Intestinal immune network for IgA production
cvg04810
Regulation of actin cytoskeleton
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107101361 (itga4)
04514 Cell adhesion molecules
107101361 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107101361 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107101361 (itga4)
04810 Regulation of actin cytoskeleton
107101361 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
107101361 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107101361 (itga4)
04515 Cell adhesion molecules [BR:
cvg04515
]
107101361 (itga4)
04090 CD molecules [BR:
cvg04090
]
107101361 (itga4)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107101361 (itga4)
Exosomal proteins of other cancer cells
107101361 (itga4)
Cell adhesion molecules [BR:
cvg04515
]
Integrins
Integrin alpha subunits
107101361 (itga4)
CD molecules [BR:
cvg04090
]
Proteins
107101361 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP_3
DUF11
Motif
Other DBs
NCBI-GeneID:
107101361
NCBI-ProteinID:
XP_015255735
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MKPSGGCVGFFFCLVLVLVCPAAAYNLDLEHSLVFKGPSSSMFGYSVLLHRHYSHKWLVV
GAPVANSSSSQVQSPGAVYRCSITAERRTCYPMPADVTSCGKTCEAESDHQWLGVSLSRQ
SSENGGLILACAHRWKNVFYSRKDSQNNKLPNGVCYQYTSDLSFSGYLIPCYKDHQRKFG
EYYGSCQAGISNVMTQDLIIMGAPGTSYWTGSVLAYNTSSGAMSVYLDDETGAVSFGSYL
GYAVGAGHFLSPSSMEVVGGAPQFSQKGKVFIFSIGNNNMMEMVSSVTGKELGSYFGSSV
CVVDLNADGLSDLLVGAPMATGTSREEGRVHVYINEGKCRIIQSDGSKDKLPVVPLLFTN
RVYKSFSKGAAKLLYSLVQEVRDVAVGAPQEDDLKGAVYIYNGRKEGISQTPSQRISGSS
LGHDLRMFGQSLNSGIDIDDNGYKDVAVGAFLSDSAVVLRTRPVIQVKASLILPEQVDQQ
AALCQALSNPTVCLNITICFHVTSKHFKGAIELQYNLTSDILHKPSFPHRFYFHGNGSSN
STRGHLKARPGHHTCVTHVVYQRKDVKDIYTPIQFEVSYQLKEKISHRSTSKALPPLKPI
LQQSTGDRNTVTNQTQFARFCSLVNCSTNMQLSSELVLPGQQSFFALGSGQIILKTSLLN
AGDDAFLPRVTLRFPNIIHFIKVLHNQDNVISCDVTEKVNATDVSIDCGITSLILPASSQ
INISFLFDVNQNSTPGDINIHINTSSANYEMENFLQDNSLTLVLPLKYGVGVSIHGFVTP
SSFVFGDEDLIPADCYPEKFNYTYKVINSGPSKAINTVVQIAVPKILAPHLHRLLQVIDL
KSSHGSCSISDKTVLVEEDCNVPQTSFIKQLMFFFSPTSTRTMYCGRRDHLCEQLVCRLG
NLEAGRDATIQLEISLNPAVLLQAPGRHPVMRVESTASLLSPREGPHTVLLKDPPVEKVV
VEAVFTQKPSMAVKIFIVVVSLVLGLLILAALIWCLWKAGFFKRSFKKQEEINRDSWDYV
PKLNKRESSI
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaagccatcagggggctgcgtgggattcttcttttgcttggttctggttctggtctgt
cctgctgcagcttacaatctggatctggagcacagtctggtgttcaaaggccccagctcc
tcaatgtttggatactcagtgctgctgcatcgccactactctcacaaatggctggtggtc
ggtgctccagtggctaattcctccagttcgcaggttcagtctccaggagcagtttatcgc
tgcagcatcacagctgagaggcgcacatgctaccctatgcctgctgatgttacaagctgt
ggtaaaacgtgtgaagctgagagtgatcaccagtggcttggcgtcagtttgtcaagacaa
tccagtgaaaatggtggactcatcctggcatgtgctcaccgctggaagaacgtgttctac
tcaaggaaagacagccagaacaacaagctccctaatggggtctgttatcaatatacaagt
gacctgagtttctccgggtacctcattccttgctacaaagaccatcagaggaaattcggt
gaatattatggatcatgtcaggcgggtatttccaacgtcatgacacaggatctgatcatc
atgggagcaccaggaacttcttattggacgggctcagttctggcctacaacacctcctca
ggagcgatgtcagtttatcttgatgacgaaacaggagctgtcagctttggaagctacctc
ggttacgctgttggagctggtcacttcctgagtccctcatctatggaggtggtgggtgga
gctccgcagttcagtcagaagggcaaggtcttcatcttctcaataggcaacaataacatg
atggaaatggtttcatccgttacaggaaaagaactcggatcttatttcggctccagtgtt
tgtgtggtggatctgaacgctgatggtttgtcagacctgctggttggagcccccatggca
acagggacctccagggaagaagggagggtgcatgtttacatcaatgagggaaagtgccgc
attatacagtctgatggcagcaaggataaattacctgtggtaccgctcctttttacaaac
agggtgtataagtcttttagtaaaggagccgctaagctcctctacagtctggtgcaggag
gtgagagatgtggccgttggcgctccacaggaagacgacctcaaaggagccgtctacatc
tacaatggcaggaaggaaggcatttcacaaacgccatcacagaggatttcagggtcctcc
ttgggtcatgaccttaggatgtttgggcagtcactgaactctgggattgatatcgatgac
aacggctacaaagatgtggctgtgggagcattcctctcagactctgctgtggttctcagg
acccgcccagtgattcaagtgaaagcttctctgattctaccggagcaggtggaccagcag
gcggcgctatgtcaagctctcagtaatccgacagtctgcctcaacattacgatctgcttc
catgttacatctaaacattttaaaggggcaatagagcttcagtataatttgacctccgac
atcctccataaaccatccttccctcaccgtttctatttccacggtaatggatcatcgaac
agcacgaggggtcatttgaaggcacggcctggccaccacacctgtgtaacacatgttgtt
taccaaaggaaagatgttaaagacatttacacccctattcagtttgaagtttcctaccag
ctcaaagaaaaaatcagccacagaagcacctccaaagccttgcctccattgaaaccaatt
ctgcagcagagcacaggggatcgtaacaccgtcaccaaccagactcagttcgcacgcttc
tgctctttggtgaactgttcaaccaacatgcagctttcaagtgaactggtgctaccggga
caacagagtttttttgctctcggctctggacaaatcatcctgaaaacctctctgctgaac
gccggagatgacgccttcctgccacgagtgacattgagattcccaaacatcatccacttc
atcaaagtgttgcataatcaggacaacgtgattagttgtgacgtcacagagaaggtgaac
gccacagacgtgagcatcgactgcggcatcaccagcctcatcctgccagccagctcccag
ataaatatcagttttctgttcgacgtcaatcagaacagcacgcctggtgacattaacatc
cacatcaacaccagcagcgccaactatgagatggagaacttcctccaagataacagcctc
acacttgttcttcccttgaaatatggagtcggcgtcagcatccacggttttgtgacccca
tcttcttttgtgttcggagacgaagacttaattccagctgactgctaccctgaaaagttc
aactacacatacaaggtgataaactctggtcccagtaaggcgataaatactgtggtgcag
attgctgtgccaaaaatccttgcaccccacctacaccgattgctgcaggtcatcgacctg
aagtcatcacatggttcatgctcaataagtgacaaaacggttctggttgaagaggactgt
aatgttcctcaaacttcgttcatcaaacagctgatgttcttcttctctcccaccagcacc
cgcacaatgtactgtggccgcagagatcatctgtgtgagcagctggtgtgtcgtctcggt
aacctggaggcagggagagatgctaccatccagctggagatcagcctgaacccggctgtg
ctcctccaagctccgggtcgtcatcctgttatgcgggtggaaagcacagcgtctttatta
tctcccagagaaggtcctcacaccgtcctacttaaagatccacctgtggaaaaggtggtg
gtggaggcagtttttacccagaaaccctcgatggctgtgaagattttcattgtcgttgtc
agtttagtattgggacttctcatcctggcagctctcatctggtgtttgtggaaggctggt
ttctttaagagaagcttcaagaagcaggaggaaataaacagggacagctgggactatgtt
cccaaactaaacaagagggagagctctatttaa
DBGET
integrated database retrieval system
