Cyprinodon variegatus (sheepshead minnow): 107101513
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Entry
107101513 CDS
T06110
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107101513 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107101513 (atrx)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107101513 (atrx)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
107101513 (atrx)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107101513 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
107101513
NCBI-ProteinID:
XP_015255949
Ensembl:
ENSCVAG00000019038
LinkDB
All DBs
Position
Unknown
AA seq
2051 aa
AA seq
DB search
MGEKGEEPGSSSDNMKPSSSHSKRKPTSVPKHKEQKDSDASTGSENEAANSDSNTGSDSK
GTLVMKPSGNENKGAMKLRVDFKQKKPDDTLEKKVNCTACGKQVNQFQRNSVYEHPMLKV
LICKSCYKYYTSDDIGRDSDGMDEQCRWCAEGGKLICCDYCNNAFCKKCILRNLGRKELS
NITDENSKWHCYVCRSDPLQDLVASCQNIMQRKEEAEMKQRKTEKAEEREARKEKKKSPK
EQKAVANGKEHNEGLGTMTFSYKNLQIPKDQLKKAKKLVETTTGLNNTFIQFIQQAADDQ
ADASIRYRHLKAFKAVLTDLRKAHNALEEALKPEFRKMELQNGIEGQHVRKAGPAVETSE
NNEMECAPDPVPSVDGERHDEVKMEVEEMKEGTKEPPEEKDLVCKSGKRTKVKKEVDGDA
DSDCRTQNEEIVEEPPNEKDISTKEAFEEPSSRTEQVDEAETMEEVVTEQQDGKANEVSD
DTQTEERQSETSPPLVVKTEVVDGQPLSSAEASLDQDIMSVPPSVPEELFQMVESLADSS
MLSRTDTTSEKDADTKSKENPPETPCPKPKVKNLIVKLTPVPVVKSGGSRSSKSKKGDDQ
EQTSKSKDKEDSAAAEGTDSPPPTRRSSRVKTTPLRKQGENKGKKDSSDSESEEDAKAKP
SKKSNNTKKKTNSSEKVLEDSDSDEVPPALLEKATRGDKSTDEEQESTAAKKRLFKSETS
SKDEKLTKRKRKSESSDSDGENKNKKTTKKKKNCSSDNSGSDSDAEKETKTKATVAKRRS
SRVKKQEDAKGEEKSSPDRKAADRKRSYEKKRKGNSPKVASKLQSSSEEEEEEEEEEAGG
ESGEDSDQQKIKPIVEDNLVGGSGVFHQSSGDEVDTKEDSQVFEDDDDDPENRIAKKMLL
AQIKSSYSSGAESSSDNEGEDVKDKSSKRPKKEEEEEDDMVTEDSESDVEVKKPGKRHKL
LRHKLSLSEAESGDEKDSGKEKKAKGSKKKSARKAVGSDDSEDTDFKDSESSSESGMSEE
VSDSGKENKRRKTRSAKKKEDENQRSYKQQKKKRRRIKVQDDSSSNEKSGEEGGESEGQE
GDGTKGRKKLRKILKDDKLRTETRDALKEEEERRKRIAEREALRQKLREVVVVEEASQMV
CPITTKLVLDEDEETKEPLVQVHRSLVTKLKPHQVDGVQFMWDCCCESVKKIQKSAGSGC
ILAHCMGLGKTLQVVTFLHTLLLCEKLDFSTALVVCPLNTVLNWLNEFEKWQEGLKDEES
LEVTELATVKRPQERAYALQQWQESGGVMIMGYEMYRNLTHGRNIKSKKLKETFQKTLVD
PGPDLVICDEGHILKNEASAVSKAMNSIKTRRRIVLTGTPLQNNLIEYHCMVNFIKENLL
GSVKEFRNRFINPIQNGQCADSTPHDVRIMKKRAHILYEMLAGCVQRKDYSALTKFLPPK
HEYVLSVRITPLQCKLYRHYLEHFTGVGNALEGGRGRAGTKLFQDFQMLSRIWTHPWCLQ
LDYISKENRGFFDEDSMDEFIASETEESSMSMTSEDEKTKNQIESTAFGPKEHLYASPIC
LSVVDLLLSTRVGGSTPGSPCSADWYKEFVTEADAEILEHSGKMMLLFEILRMAEEVEDK
VLVFSQSLISLDLIEDFLELSSRGEDSEKPSPYKGEGKWYRNIDYYRLDGSTNAPTRKKW
AEDFNDTSNTRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVK
PVYVYRFLAQGTMEEKIYERQVTKQSLSYRVVDQQQIERHFTMNELAELYTFEPDMLDDP
SEKKSKRATPMLPKDPILAEMLQNNKDQIVCYHEHDSLLDHKEEEALSEEDRKAAWAEYE
AEKKGLSTRTNYPMSYAQPDMGTSNYFSFNMAALATMSNQQLEDLISQGRQKVIEATNAL
KALARETMEDIIARIWKENPTLTENEVQALTLRHQANVEIELKRREAIYRDVLTRQQTLM
MYVQKLITNRKVQEQQLAMANQATYLNQLALQNGMMAGGMNQMNLLGLYQRLHGMGGNQS
DGKNPGPSQGM
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atgggagagaaaggagaggagcctgggagctcatcagacaacatgaaaccatcttcctct
cacagcaagaggaaacccaccagtgtacctaagcacaaagaacagaaagactcagatgca
tcgactggcagcgaaaatgaagctgccaattctgacagtaatacaggcagcgattctaaa
gggaccttagtgatgaaaccgagcggaaatgaaaacaaaggtgccatgaagctaagagtg
gatttcaaacagaaaaaaccagacgataccctggagaagaaggttaactgtacagcctgc
gggaaacaagtaaaccaatttcagcgcaactctgtgtacgagcatccaatgctcaaggtt
ctcatctgcaagtcatgttataaatactacacaagcgatgacatcggccgggattcagat
gggatggatgagcaatgcagatggtgtgctgagggcgggaagctcatctgctgtgactac
tgtaacaacgccttctgcaaaaagtgcatactgcgaaacctgggcagaaaggagctgtca
aacatcacggatgagaactcaaagtggcactgctatgtgtgccgctctgaccccctgcag
gatctggtcgccagctgccagaacatcatgcagaggaaggaggaagctgagatgaagcag
cggaaaacggagaaagcagaggagcgggaagcgaggaaggagaagaagaagtctcctaaa
gagcagaaagctgttgcaaatgggaaagagcacaacgaaggcttggggaccatgaccttc
tcttataaaaacctgcagatacccaaagatcaactaaaaaaggcaaagaagcttgtagaa
acgacaaccggtttgaataacaccttcattcagttcatccagcaggcggccgacgaccag
gcagacgcaagcatcaggtatcgacatttgaaagcctttaaggcggtgctgaccgatctg
aggaaagcccacaacgctttggaggaagctttaaagccagagttcagaaaaatggagttg
cagaacgggatcgaagggcaacacgtgagaaaggccggccccgctgtggaaacctccgag
aacaatgagatggagtgtgccccagatccggtccctagcgtggatggcgagcggcatgat
gaagtaaagatggaggtggaagaaatgaaggaggggaccaaggagccgcctgaggagaag
gatttggtgtgtaaatctggcaaaaggacaaaggtgaagaaggaggtggatggtgacgca
gattcagattgtagaacacaaaatgaggagattgttgaagagccgcctaatgagaaggac
atttcaacaaaagaggcgttcgaggaaccatccagtagaacggaacaggtcgatgaagca
gaaaccatggaggaggtagtgacggagcagcaggacggtaaggccaatgaagtgtctgat
gacactcagacagaggaacggcaaagcgaaacaagcccgccgctagtggtaaaaaccgag
gtcgttgacggccaaccgctgtcctctgctgaagcgtcattagatcaggacatcatgtct
gtgcctccttcagttccagaggagcttttccagatggtggagagtctcgctgattcctcc
atgctctcaaggaccgacaccacttcagagaaagacgcagacacaaagtcaaaggagaat
cctccagaaactccttgtcccaaacccaaagtaaagaacctgatagtcaaactgactcca
gtgccggttgttaaaagtggcgggtctaggtcctccaagtctaaaaaaggagatgaccag
gagcagaccagcaagagcaaggataaggaagattctgctgcagcagaagggacagacagc
ccaccgccaacccgccgctccagcagagttaagaccactcctttacggaagcaaggggaa
aacaaaggcaagaaagactcctctgattcagagtctgaggaagacgccaaggccaagcct
tcaaagaaatccaataacactaaaaaaaagactaacagttcagagaaagtgttggaagac
tctgattcagacgaagttcctcctgctctgctggaaaaagccacaagaggcgacaaaagc
acagatgaggagcaggaaagcacagctgccaaaaagcgtctgtttaaatcagaaacgtcc
tcgaaggacgagaagttaacgaaacgcaaaaggaagtccgaaagctctgattcagacgga
gagaataaaaacaagaagacgactaagaagaagaaaaactgcagctcggacaactctggg
tcagactcagacgcggagaaggagaccaaaacaaaagcaaccgtggccaagaggagatct
agccgtgtaaagaagcaagaagacgcaaaaggggaggagaaaagctcaccggacaggaag
gctgctgatcggaagcgttcctatgaaaagaagcggaagggaaatagcccgaaagtcgcc
tccaagctgcagtcttcatctgaagaagaagaagaggaggaggaggaggaggctggcggg
gaatccggagaagatagtgaccagcaaaagatcaaacccatcgtggaggataacttggtc
ggaggcagcggagtcttccatcagtcctctggagacgaggtagacactaaagaagactcg
caggtgtttgaagacgacgacgacgaccctgagaacagaattgcaaagaaaatgctcctc
gcacaaataaagtccagttactcttcaggagcagaaagctcctctgacaatgaaggggaa
gacgtgaaagacaagtcctctaagagacctaaaaaggaggaggaagaggaagatgacatg
gttacagaagactctgagtccgatgttgaagtgaagaagcctggcaaacgtcacaaactg
ctccgccacaagctctccctgagtgaggcggaatctggggacgagaaagactcgggcaag
gagaaaaaggccaaggggagcaagaaaaaatctgcacgtaaagcagttggcagcgatgac
tctgaagacactgacttcaaggactctgagtctagttcagaatcggggatgagtgaagag
gtcagcgactcagggaaggagaacaagcgcagaaagaccagatctgcgaagaagaaggaa
gacgagaatcagagaagttataagcaacagaaaaagaagcgacgcaggatcaaagttcag
gacgactcttccagcaatgagaagagtggagaggaaggaggtgagagcgaagggcaagaa
ggagacggaaccaaaggccggaagaagctccgcaaaatcctgaaggacgacaagttgagg
accgagaccagagacgctctgaaggaggaggaggagaggaggaaacgcatcgcagagcga
gaggcgctcaggcagaaactgagagaggttgtggttgtagaggaagcatcccagatggtc
tgccccatcaccaccaagctggtattggatgaagatgaagagaccaaggagccactcgtt
caggtccacaggagccttgtaacaaaactcaagcctcatcaggttgatggtgttcagttt
atgtgggactgctgctgtgagtctgtgaaaaagattcagaaatctgcaggttctggctgc
atcctggctcactgcatgggtctaggaaaaactctgcaggtggtgacattcctccacacc
ctgctgctctgtgagaagcttgacttcagcacagctctggtggtttgtcctctcaacact
gtccttaactggctcaatgagttcgagaaatggcaggagggactgaaggatgaggagagc
ttggaggtaacggagcttgctacggtcaagaggccgcaggagcgtgcgtacgccctccag
cagtggcaggagtcgggcggcgttatgatcatgggttatgagatgtacagaaatcttacg
cacggccgaaacatcaagagcaagaagctaaaagagacgtttcagaaaaccctcgtagat
ccaggtccagacttggtgatctgtgacgaaggccacatcctgaagaacgaggcgtccgcc
gtctccaaagcaatgaactccatcaagacgaggaggaggattgtgctgactggaacgcct
ctgcagaataaccttattgaataccactgcatggtgaactttataaaggagaacctgctt
ggatccgtcaaagagttcagaaaccgcttcattaaccccattcagaatggccagtgtgcc
gactctacgccgcatgacgtccggattatgaagaagagggcacacatcctttatgagatg
ctggccggctgcgtccagagaaaagattactcggcgctcacaaagttccttccgcctaaa
cacgagtacgtgctgtcggtcagaataacgccgctccaatgtaaactctaccgacattac
ctggagcactttacaggtgtgggaaacgctctggaaggaggccggggccgagcaggaacg
aagctgttccaggatttccagatgctcagcagaatctggacccatccctggtgccttcag
ctggactacatcagcaaagaaaacaggggcttctttgacgaggacagcatggatgaattc
atcgcttcggagacggaagaatcctccatgagtatgacctcagaggacgagaagaccaaa
aatcagattgagagcacagcctttgggccaaaggagcacctctatgcttctcctatctgc
ctttctgttgtagatttgctgctgtcaacccgggtgggcggctctacgcctgggagtccc
tgctctgccgactggtacaaagagtttgtcactgaggccgacgccgaaatcctggagcac
tcaggaaagatgatgctactctttgaaattctgcgcatggctgaggaagtagaagataaa
gtgttggtgttcagtcagtctctcatctctcttgacctgatagaggattttctagaactt
tccagcagaggcgaggattctgagaaaccctctccatacaaaggtgaaggaaaatggtat
agaaacatcgactattaccgcctggacggctccactaacgctcctaccaggaagaagtgg
gccgaggactttaatgacaccagcaacacaaggggtcgtttgtttctcatatcaacgcga
gctggatctctcggcatcaacctggtagcggccaacagggttatcatctttgacgcctcc
tggaacccgtcgtatgacatccagagtatcttcagggtttatcgctttggacaggtcaaa
cctgtctacgtctacaggtttcttgcacaaggtacaatggaggagaagatttacgagcgg
caggttaccaagcagtctctgtcctaccgagttgtggatcagcagcagatcgagagacac
ttcaccatgaacgagctagctgagctctacacgtttgagccggacatgctggatgatccc
tctgagaagaagagcaagagggctacacccatgctgccaaaggatcccatcctggccgag
atgctacagaacaacaaggatcagatagtgtgctatcatgagcatgactctctgctggac
cacaaggaggaggaagccctgagtgaggaggatcgcaaggcggcgtgggccgagtatgaa
gcagagaagaagggtctgtctaccaggaccaactaccccatgtcctatgctcagccagat
atgggcacctccaactacttctccttcaatatggcagctttggccacaatgtccaaccag
cagctggaggatctcataagccaggggcggcagaaggtcattgaagcaacgaatgcttta
aaagccctagctcgtgagacaatggaagacatcattgccagaatatggaaggaaaatcca
actctcacagagaacgaggtccaggctttaactctgagacaccaagctaatgtggagatc
gagctgaagcgcagggaagccatttatagagacgtcctcaccaggcagcaaacgctgatg
atgtacgtacagaagctgatcaccaacagaaaggtgcaggagcaacaactggccatggcc
aaccaggccacctacctgaaccagctggccctgcagaacggcatgatggcaggcgggatg
aaccagatgaacctgctggggctttaccagcgcctccacggcatgggcggcaatcagagc
gacggcaagaacccgggcccctcacagggcatgtag
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integrated database retrieval system
