Cyprinodon variegatus (sheepshead minnow): 107101525
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Entry
107101525 CDS
T06110
Symbol
gabra6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107101525 (gabra6)
04082 Neuroactive ligand signaling
107101525 (gabra6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107101525 (gabra6)
Ion channels [BR:
cvg04040
]
Ligand-gated channels
GABA-A
107101525 (gabra6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
107101525
NCBI-ProteinID:
XP_015255962
Ensembl:
ENSCVAG00000018557
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MAAALLTVVALICSIGLGNAQGGEKVYSDNITRILDRLLDGYDNRLRPGSGGGITEVKTD
IFVTSFGPVSDVEMEYTMDMFFRQMWVDERLKFEGPIEILRLNNRMVDKIWTPDTFFRNS
KKSISHNMTTPNKLFRIMQNGTVLYTMRLTISAECPMRLMDFPMDGHACPLRFGSYAYTN
SEIIFTWRKGLTASVECPKESMSLLQYDLVGQNLSSEIMKSNTGHYSVQVVHFLLQRKLG
YYLIQTYIPLIMVVVLSQVSFWINKESVPARTVAGATTVLTMTTLSISARQSLPKVAYAT
AMDWFIAVCFAFVASALVEFAAVNYFASLQANRLKKQRARQDRLEVLATGSDDDDTLSTD
SSSFREGLKRRNHSVSCSEPGDVTPVPIFLQQGSAFPQIPQLAGTSPIDRYARILFPLTF
ALFNLGYWYIYLTKETMEWAT
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcccttttaactgtggttgccttaatctgctcaattggtctaggtaatgca
caaggaggtgagaaggtgtattcagacaacatcactcgcattctggatagacttttggat
ggttatgacaatagactgcgacctggttcaggaggtggtattacagaggtaaaaaccgac
atctttgttaccagctttgggcctgtttcagatgttgagatggaatacaccatggacatg
ttcttccgtcagatgtgggtggatgaacggctgaagtttgagggccccattgaaatctta
cgtcttaacaaccgcatggtggacaagatatggacgccagacaccttctttagaaattca
aagaagtccatttcccataacatgaccacacccaacaagctctttcgcataatgcagaat
gggaccgtcctttacaccatgagactaacaatcagtgcagagtgtccaatgaggctgatg
gacttccccatggatggccacgcctgtcctctcaggtttggaagctatgcatataccaac
agtgaaattattttcacctggaggaagggtctaacagcttctgtggagtgtcccaaagag
tcaatgagtcttctgcagtacgatctagtcgggcagaacttgtccagtgagataatgaag
tcaaacacgggtcattattctgtgcaggtggtccattttcttctccagagaaagcttgga
tactacctcatacagacctatatccccctcatcatggttgttgtactgtcccaagtttca
ttttggatcaacaaggaatctgttccagcgcgtacagttgctggcgccaccacggtgctg
acgatgaccaccttgagtattagtgctcggcagtccttgcctaaagttgcatatgccaca
gccatggattggtttatcgctgtatgttttgcctttgtggcctctgctctggttgagttt
gcagcagtgaactattttgccagcttgcaggcaaaccgcctgaagaagcagagagccaga
caagacaggctggaggtgctggccactggcagtgacgatgatgacaccctttctacggac
agcagcagcttccgagaaggcctgaagcggagaaaccactcagtgagctgcagtgagcct
ggagatgttaccccagtcccaattttcctccagcagggttcagcttttcctcaaatccct
cagcttgctggtacaagcccgattgaccgctacgcccgcatcctatttcccctgacgttt
gccctttttaacctcgggtattggtacatctacctgaccaaagagaccatggagtgggca
acgtga
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