Cyprinodon variegatus (sheepshead minnow): 107101561
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Entry
107101561 CDS
T06110
Symbol
slitrk2
Name
(RefSeq) SLIT and NTRK-like protein 2
KO
K25833
SLIT and NTRK-like protein 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecule (CAM) interaction
cvg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107101561 (slitrk2)
04517 IgSF CAM signaling
107101561 (slitrk2)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
MCLC
Motif
Other DBs
NCBI-GeneID:
107101561
NCBI-ProteinID:
XP_015256002
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MLSGVLFLSILTVTSLTPSETQSRKTSALKDICKTRCDCEERENVLNINCENKGFTTVSQ
LQAPPNKISQLFLNANFLSRLSANEFISYGNVTSLHLGNNGLQEIQTGAFSGLRFLKRLH
LNNNNLEVIKEDTFAGLESLEYLQADYNYISSIEPGAFSKLNKLKVLILNDNLLLALPPN
IFRFVLLTHLDLRGNRLKMLPFAGVLEHIGGIMEIQLEENPWNCTCDLIPLKSWLDTISV
FVGDIVCETPFRLHGKDITQLIKQDLCPRRNAGERAQTASDSHFQGAPHPTYHAGVVSPT
RSPKASRPPKMRYRPTPRLSKDRNVFGPIMVYQTRSPVPMLCPSVCVCTSQNPDSGLNIN
CQERKLQNISELTPKPTYPRKLHLTGNYLQVIYRLDLTEYSSLELLHLGNNRIAVIQDGA
FENLTNLRRLYLNGNYIESLSQSLFAGLQSLQYLYLEYNIIKEILPQTFNSLHNLQLLFL
NNNLLRSLPHNVFAGTMLTRLNLRNNHFSYLPVEGVLDHLSAFIQIDLQENPWDCTCNIV
ALKNWMELSSTSVVVNEITCDSPSKHAGRLLRSLRNEAICPEPSEPPPPQLPPPTKAPTV
ISPTEATTPLSPSPSPFFSSVSPTDSHLQAPELHPEVPLSVLILGLLVVFILSVCFGAGL
FVFVLKRRKGVEHVPTGANNLDLNSFQVQYGSYTPEPIHDKSSESHVYNYIPPPVGSMCQ
NPIYMQKDGEQVAYYRNLKELSFGPLDVKKGDILSRSPGAYTISSVDFMEKSPTCGLASQ
EPPEMLYQNIGERPNKELPAAAGAPPFTYNFCTLPKRPCIVPPYEAATARRHVTNQDRLN
KTVLYGTPRKYFGPEHVSKNNEHPSLLLPCKLKAEPDYLEVLEKQTAMSQL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcggcgtcctgtttctgagcatcctcaccgtcaccagcttgacaccgtctgaa
acgcagagccgcaaaacttcagccctcaaagacatctgcaagacacgctgcgactgcgag
gagcgggagaatgtgctgaacatcaattgtgagaataagggatttaccacggtcagccag
ctgcaggctccccccaacaagatctcacagctctttctgaacgcaaacttcctgtcaagg
ctcagcgccaacgagttcatcagctatggcaacgttacgtctctgcatctgggaaataac
ggcttacaggaaattcagactggagcgtttagtggacttcgcttcctcaagcgcctccac
ctgaacaataacaacctggaggtgatcaaagaggacacctttgcagggctggagagtttg
gaatatttacaggcagactacaactacatcagcagcatagagcctggtgcttttagcaag
ctgaacaagctcaaagtgttaatccttaacgacaacctgctgctggctctgcctccaaac
attttccgctttgtgctcctcacccacctggatttacgtggcaatcgtctgaagatgctg
ccatttgctggggtgctggagcacattggcggcatcatggagatccagctggaggagaac
ccgtggaactgcacctgtgacctgatccccctcaagtcctggttggacaccatctccgtc
tttgtaggggacatcgtgtgtgagacgccgttcaggctccacgggaaggacatcactcag
ctcatcaagcaggacctgtgcccccgcaggaacgctggggaacgggcgcagacagcctca
gactctcacttccaaggggccccacaccccacctaccacgctggtgtcgtcagccccacc
cgctctcctaaagcatcccggccccccaaaatgcgctacaggcccactccccgcctctcg
aaagacagaaacgtctttggacccataatggtctaccaaacccgttctcctgtccccatg
ctgtgtcccagtgtgtgtgtttgcacatcacaaaaccctgacagtggactgaacatcaac
tgtcaagaaagaaagctacagaacatcagtgaactaacccccaagcccacctaccccagg
aagctccacctgactgggaactacctgcaggtgatctacagactggatctgactgagtac
agctccctggagctgctgcatttagggaacaaccgaatcgcagtgattcaggatggagcc
tttgagaacctgaccaacctcaggcgcctctacctgaatgggaactacatcgagtctctg
tcgcagtccctgtttgctggtctgcagtccctgcagtatctttatctggaatataacatc
ataaaagaaattctaccacagacatttaactctctgcacaacctgcagctgcttttcctt
aacaacaacctgctgagatctctccctcacaatgtctttgcgggcaccatgctcacccga
ctcaacctgaggaacaatcacttctcttaccttccggttgaaggtgttctggaccacctg
tcggcgttcatccagatcgacctgcaggagaatccctgggactgcacctgcaacattgtg
gccctaaaaaactggatggagctgtctagcaccagcgtggtggtcaatgaaataacctgt
gactctccgtctaagcacgcagggcggctgctgcgctcactccgcaacgaggccatctgc
cccgagcccagtgagccccctcctccacagctgccccctcccacaaaggccccaacagtg
ataagtcccactgaggccaccaccccactttctccgtccccctccccttttttcagctca
gtgagccccacagattcccacctccaggccccagagctgcacccggaggtgcccctctca
gtcctgatcctcggccttcttgtggtcttcatcctgtccgtgtgcttcggtgcaggcctc
tttgttttcgtcctgaagcgacgcaaaggggtagagcatgtcccaacaggggccaacaat
ctggatctcaactctttccaagtgcagtacggctcctacaccccagagccaatacatgac
aaaagctcggagagccacgtgtacaactacatccccccacctgtgggctccatgtgccaa
aaccccatttacatgcagaaggacggtgagcaggtggcctattaccgaaacctgaaggag
ctcagctttgggcccctggacgtaaaaaagggggacatcctaagccgcagcccaggagcc
tacacaatcagcagtgtggattttatggagaaatccccaacgtgtggcctggccagccag
gagcctccagagatgctctaccagaacattggtgagaggcctaacaaggagctccctgca
gcagcaggcgccccccccttcacctacaacttctgcacgctgcctaagagaccctgcatc
gtgcccccctacgaggccgccacggcccggagacacgtgaccaaccaggacaggttgaac
aaaactgtgctgtatggcactcccaggaaatactttggacccgaacacgtctccaaaaac
aacgagcacccctcactactgctgccttgcaaactaaaagccgagccggactacctggag
gtgctggagaaacagactgccatgagccagctgtaa
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