Cyprinodon variegatus (sheepshead minnow): 107101572
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Entry
107101572 CDS
T06110
Symbol
myo5a
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107101572 (myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107101572 (myo5a)
04131 Membrane trafficking [BR:
cvg04131
]
107101572 (myo5a)
03029 Mitochondrial biogenesis [BR:
cvg03029
]
107101572 (myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107101572 (myo5a)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107101572 (myo5a)
mRNA cycle factors
P-body specific factors
107101572 (myo5a)
Membrane trafficking [BR:
cvg04131
]
Others
Actin-binding proteins
Myosins
107101572 (myo5a)
Mitochondrial biogenesis [BR:
cvg03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107101572 (myo5a)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107101572 (myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
IQ
DIL
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
107101572
NCBI-ProteinID:
XP_015256012
LinkDB
All DBs
Position
Unknown
AA seq
1540 aa
AA seq
DB search
MAASELYSKNAHVWLPDAAEVWKSAELLKDYNPGDSTLSLQLEDGTVLEHRIDPKTPNLP
PLRNPNILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
ADIINAYSGQNMGDMDPHIFAVAEEAYKQMARGERNYHIFYQLCASSHLPEFKAFKLGCA
EDFCCTNQGQSPVIDGVDDAREMCSTRRAFSLLGINESDQLDIYQILSAILHLSNVDVKE
QSADRCSILPDNAHLMVFCELMGVPCDEIAHWLCHKKLQTTTETFVKPVSKVNAVHGRDA
LAKHIYARLFTWIVSSINAALTSTVKQRSFIGVLDIYGFETFDVNSFEQFCINYANEKLQ
QQFNLHVFKLEQEEYMKEEIPWTLIDFHDNQPCINLIEAKLGVLDLLDEECKMPKGSDDT
WAQKLYNTHLKQSAYFDKPRLSNKAFIIHHFADKVEYHCVGFLEKNKDTVNEEQINVLKK
SKFDLLLKLFEDEEKNKASTNKLSSSGRAGKAQRDTKKTVGLQFRQSLHLLMDTLNATTP
HYVRCIKPNDIKAPFTLDPVRAVQQLRACGVLETIRISAAGFPSRWTYQEFFGRYRILMK
QKEVLPDRKQSCKNLLEKLTQDQQKYQFGKNKIFFRAGQVAYLEKLRSDKLRSACVSIQK
TIRCWVARRKYLRMRESAIIIQKHVRAHQARSYVQFLRKTKAAIVIQSNVRMWSKKRRFL
QQRSAAVTIQRVWRGHMARKQYFKLLFESKALVIQKTVRGWLAKQRFRRAMEAVVLLQSC
VRRMRAKKELKKLRVEARSVEHFKKLNVGMENKIMQLQHKINEQHKENRELTEKLSVLEK
TNSTEREKQSREIENLRKSEQEARGKAETVPSLLEQLSFLQEELENTRREKEELEVHTKT
LKEQTRQTIHELNMKNSLLKSNIEELNQEFSIQAQQLTEIKNTLENSKQLEKDLTEERCR
YQSLLSEHLQLEEQHKDLKEEMSVSVISSKFSHQRTDSNYSSNSSEFSQILSSTEDEEGF
TQAEDPSEKKVDLPILLKLQRRVKELEEENRSLWHQLDKKEEAQQEKAKEVEKQTTVGRT
ELDVEKIKRQELESENKRLKQDLSELRKSLTNENSDLAPPAAGSLPYNILLDQLSSSNEE
LEMRKEEVLLLRSHMVRQEALKHRDSVLGESVKLDLSEIHSFQDSDSINPTERMEEQEKQ
DKTIRKLKKQLKLYMKKVEDLEAVAHQMNTSSVTSTPVTQVHITRKEKEFQGMLEFKEAD
AGRLLKNLVLDLKPRGVAVSFTPGLPAFIIFMCVRYADSVNDDRRLSTLLNSTISSIKGV
IKRKGNDFEVVCFWLANACRLMHCLKQYSGEEAFTVHNTAKQNKQCLANFELSEYHQLFG
DLAIQIYRQLIKSMENILLPLIDPEYNIWQLEEWLAERELTDCGAKETLEPLVQAAQLLQ
IKKSTEADAQAICSMCSSLTSAQIVKILTLYTPVIEFEERVSNSFITTIKDILKVRDESS
SLMMDAKKIFSVTFPFSPSPVPLESIQIPTSLNLGFLIRV
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctctgaactttactccaagaatgcccacgtttggctcccagatgcagcagaa
gtttggaaatctgcagagctcctcaaagactacaatcctggtgactcgactctgtctttg
cagctggaagatggaacggttttggagcacagaatagaccccaaaaccccaaacctgccc
cctctcagaaaccccaacatcctggtgggagagaatgacctcacggctctcagctacctc
cacgagccggccgtgctgcacaaccttaaagtgcgctttatcgactccaagctgatttac
acctactgtggaattgttctggttgctatcaatccctatgagagcctgcctatctatgaa
gctgacatcatcaacgcctacagcgggcaaaatatgggcgatatggacccccatatcttt
gcagtagctgaggaagcatacaaacaaatggctcgtggagaaaggaactaccatatattt
tatcagctttgtgcttcttcacatctgccagagtttaaagccttcaaattaggctgtgca
gaagatttctgctgcactaaccagggtcagagtccggtcatagatggagtggacgatgcc
agagaaatgtgcagcaccaggagggcgttctcactactaggaatcaatgaaagtgaccaa
ctggacatttaccaaattctgtcagctattctccatcttagcaacgtggatgttaaagag
cagtcagcagacagatgcagcatcctgccagataacgcccacctgatggttttctgtgag
ctcatgggggttccctgcgatgaaatagcccactggttatgccacaagaaactccagacc
accacagaaacctttgtgaagcctgtttccaaagtaaacgcggtgcatggcagggacgcg
ctggccaaacacatctatgccagactcttcacctggatcgtgagcagcattaacgccgcc
ctgacctctacagtcaaacaacgctcgttcattggcgtgctcgacatctacgggtttgaa
acgtttgatgtcaacagctttgagcagttctgcatcaactacgccaacgagaagctccag
caacagttcaacctgcatgtctttaagctggagcaagaggaatacatgaaggaggagatt
ccctggacattgattgatttccatgacaaccagccgtgcattaatctcattgaggccaag
cttggtgttctggaccttctggacgaggagtgcaaaatgcccaaaggctctgacgacaca
tgggctcagaaactgtacaacacccacttgaagcagagcgcttactttgataaaccccgg
ttatcaaacaaagctttcatcatccaccactttgctgacaaggtggagtaccactgtgtt
ggatttctggagaaaaataaggacacagtcaacgaggaacagataaatgtgctgaaaaag
agcaagtttgatctgctgctgaagctgtttgaggatgaagaaaagaataaagcatcgact
aacaagttatccagttctggaagagctggcaaggctcaaagggacaccaagaagactgtt
ggactgcagtttcgacagtctctacacttactaatggacacattaaatgcaacaacgccc
cattatgtgcgctgcatcaaaccaaatgacattaaagctcccttcactttggaccctgtg
agggctgtgcagcagctccgagcgtgtggcgtcctggaaacgatccgtatctctgcagca
ggattcccttctaggtggacctaccaggaattctttggccgttatcggatcctcatgaag
caaaaggaagtgctgccagacaggaaacaaagctgcaaaaacctccttgaaaaactcacc
caggaccaacagaagtaccagtttggcaaaaacaagatcttcttcagggccggccaggtg
gcttacttggagaagttgcgttctgacaaactgcgttcagcttgcgtcagcatccagaag
acgatccgctgctgggtcgctcgcagaaagtatctgaggatgagagagtccgccatcatc
attcagaagcatgtacgggcccaccaagcacgcagttatgtgcagtttctgcggaagacc
aaagcagctattgttattcagagcaatgtgcgaatgtggtctaaaaagagacgtttcctg
cagcagcgctctgcagctgtcaccattcagcgggtttggaggggtcacatggcgagaaag
cagtacttcaagctgctgtttgagagcaaagcattggtaattcagaagacggttagaggc
tggctggcgaagcagcgtttccggcgcgccatggaggccgtggtcctgctgcagagctgc
gtgcgccgcatgagggccaagaaggagttaaagaagctgagagtcgaggcgcgctcagtg
gagcatttcaaaaagctcaacgttggcatggagaacaagatcatgcagctgcagcacaag
atcaacgagcagcataaagaaaacagagagctcacagagaagctcagcgttctggagaag
accaactccaccgagagagaaaaacagagcagagagatagaaaacctgcgtaaatctgag
caggaggccagaggtaaggcagagacggttccctcgctgctggaacagctgtccttcctt
caggaggagctggaaaatacccgcagagagaaggaggagctggaggtccacacaaagact
ttgaaagaacagacccgacagacgatccatgagctgaatatgaagaacagcttgttaaaa
agcaacatagaagaactaaaccaggaattctccatacaggctcagcagttaacagaaatt
aaaaataccttggagaacagcaaacagctggagaaggacttgacagaagagcgctgtcgc
taccaaagtctgctgagtgaacatctgcaactggaggaacaacacaaggatctcaaggag
gagatgagcgtcagtgtgatttctagcaaattcagccaccagagaacggactccaactac
agcagtaattcatctgagttttctcaaatcttgagttccactgaggatgaagagggcttc
actcaagcagaggatccgtctgagaagaaagtggacctgcccattcttctaaagctccag
agacgagtgaaggagctggaggaggaaaatcgatctttatggcatcagctggataaaaaa
gaggaagctcagcaggaaaaagctaaggaggtggagaagcagacaactgttggcagaaca
gaactggacgtagaaaaaataaagcggcaagagctggagtcagagaacaagaggctgaag
caggatctcagtgagttgcggaagtctctgactaatgagaacagtgatttggcgccccct
gctgcaggttctttgccctacaacattctgctggatcaactcagttcttccaacgaggag
ctggagatgcgtaaggaggaggtgttgctcctccgttcacatatggttcgtcaggaagct
cttaaacacagggactctgtactcggagaaagtgtgaaactggatctcagtgaaatccac
tcattccaagattctgacagtataaatcctactgaacgaatggaggaacaagaaaaacaa
gataaaacgattcgcaagctgaaaaaacagcttaaactctacatgaaaaaagtggaagat
ctggaagcagttgctcatcagatgaacacctcctctgtgacgagcacccctgtcacacag
gtgcacatcacccgcaaggagaaggagttccagggcatgttggagttcaaggaggccgac
gcgggacgcctgttaaagaacctggtcttagacctgaagccccgtggcgtggctgtcagc
ttcactccagggcttcctgccttcatcatcttcatgtgcgttcgctatgcggacagcgtc
aacgacgacaggagactcagcactctcctcaactccaccatcagcagcatcaaaggagtc
atcaagagaaaaggaaacgattttgaagttgtctgcttctggttggccaacgcgtgtcgg
ttaatgcactgtctgaagcagtacagtggggaggaggcgtttacggtgcacaacactgct
aagcagaacaagcaatgcctggccaactttgagctgtctgagtaccatcagctgtttggt
gacctggccatccaaatttaccgtcagctcatcaaaagcatggagaacatcctgctcccc
ctgatagatccagagtacaacatttggcagctggaggagtggctggcagagagggagctg
actgactgcggtgcaaaggaaactctggagcctcttgttcaagctgcacagcttttacaa
atcaagaagagcactgaagctgatgcccaggcaatctgcagcatgtgctcctccctcacc
tcagcacagattgttaaaatccttaccttgtacaccccggtgattgagtttgaggaaaga
gtgtccaactccttcatcaccactattaaagacattttgaaagtcagagatgaatcttcc
agcctaatgatggatgccaagaaaatcttctctgtgacgttcccattcagcccttcccct
gtgcctctggagagcattcagatccccaccagcctcaatctgggcttcctcatccgagtc
tag
DBGET
integrated database retrieval system
