Cyprinodon variegatus (sheepshead minnow): 107101591
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Entry
107101591 CDS
T06110
Name
(RefSeq) partitioning defective 6 homolog alpha-like
KO
K06093
partitioning defective protein 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
cvg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107101591
09144 Cellular community - eukaryotes
04530 Tight junction
107101591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107101591
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
107101591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
107101591
NCBI-ProteinID:
XP_015256057
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MLSLMFPGAPAPWNGSSGKNLLLSDLLQKISVEETVQVGGGSSREPRLLWNQQTSSRTTF
QRLWTGRSEGKGVGASLISSEFLHFSSQSPDDERKNFSFISVGPAWIISADSWKPGRLFQ
QQQQQQQQQRTPIRHTDSTVEVKSKFEAEYRRFGLKRNSFGGFKEFYQILQTIHHIHGDD
VLLEYADVHGDLLPINNDENFHKAVSLANPVLRIIITKKGGESTAYCTNSLQRRRKGLGL
PGLRPAGSSTTLSKNKSGIMIGPPQDFRQISSIIDVDILPETHRRVRLHKNGSNKPLGFY
IRDGVSVRVTPQGVEKVPGVFISRLVRSGIAESTGLLAVNDEILEVNGIDVAGKSLDQVT
AMMVANSHNLIVTVKPVNQRNNIAPRGSKNSMGHSGSVGSGGSIGSALSHDSPSPASQSN
PITAR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgctcatgttccctggggcccccgccccgtggaacggcagcagtgggaagaac
ctgctgctgtctgacttgttgcagaagatctcggtggaggagacggtgcaggtgggtgga
gggtccagcagggagcccaggctgctgtggaaccaacagaccagcagcaggacaaccttc
cagcggctgtggacaggccgatccgaggggaagggggtcggagcatccctcatctcctct
gagttcctgcacttctcctcacagagtccagatgatgaaaggaagaatttctccttcatt
tctgtgggtcctgcatggatcatctctgcagacagctggaaaccagggaggctcttccag
cagcagcagcagcagcagcagcagcagcggacccccatcagacacaccgacagcaccgtg
gaggtgaagagcaaattcgaggcggagtatcgccgttttggtctgaagaggaacagcttc
ggtggcttcaaggagttctaccagatcctccaaaccatccatcatatccatggcgacgac
gtgctgctggaatatgctgacgtccacggagatctccttccaatcaacaatgacgaaaac
ttccacaaagccgtctctctggccaatcccgtcctccggattatcataaccaaaaaaggg
ggcgagtccactgcttactgcaccaactccctccagaggcgcaggaaaggactgggctta
ccagggctgcgcccagcgggttctagcaccaccctctccaagaacaagtcgggcatcatg
atcggccccccgcaggacttcagacagatctcctccattatcgatgtggatattttacct
gagacccaccggcgggttcggctccacaagaacggttctaataaacccctgggcttctac
atccgggacggggtgagcgtgcgggtgacgcctcagggcgtggagaaggttccaggagtc
ttcatttctcgcttagttcggtccgggatagcagagagcaccggattactggctgttaat
gacgaaatcctggaagtcaacggcatcgacgtcgctggaaaatctttagatcaggtgacg
gccatgatggtggccaacagccacaacctgatagtgacggtgaaaccagtcaaccagagg
aacaacattgctcctcgagggagtaaaaactccatgggtcactctggttctgtgggctcc
ggcggctccattggctctgctctgtcacatgactccccaagccccgcctctcagagcaac
cccatcactgcaaggtag
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