Cyprinodon variegatus (sheepshead minnow): 107101680
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Entry
107101680 CDS
T06110
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
107101680 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107101680 (slc24a1)
Transporters [BR:
cvg02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
107101680 (slc24a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_Ca_ex
Nop14
Motif
Other DBs
NCBI-GeneID:
107101680
NCBI-ProteinID:
XP_015256166
Ensembl:
ENSCVAG00000019525
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MHCTRRKRLQLSRVLFLLSGVFLCTLYQLTISARLQQPMSVAQIGDDFGEGSTEGVEEAP
AETGGLEEPFTVEPELERTDQTTSTHVIPHTDKGMVKNTDTDATKPPTSTESPLLPTTNR
TIVHCIYVAPEPPLVTPTPVPAPPTTTASPAPPGEAPHVKGEYPEDIFSIEDRRRGWVIL
HILGMMYMFVSLAIVCDEFFVPALGVITDKLAISDDVAGATFMAAGGSAPELFTSLIGVF
IAHSNIGIGTIVGSAVFNILFVIGMCALFSREILHLTWWPLFRDVSFYILDLILLIIFFL
DNVIMWWESMMLVACYSLYVVFMKFNVQLEREFKTQLHKHKSIVKVIAVEEPEKTNGEGE
DNAPPAPEDKNRLKLKPSLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGDGKFKDKVETL
NNVARRKSVSKPQDKSEAKGGTIEETKEPEAAPAKDAEKKEQPEEKKVLPTHDLLAFKKP
RSQSLIPVYDDVPAEQGGSEDSDNSDSEEDDSEEDDSEEESDESSEEEDKEEDKEEEEGE
KEDDPLSLQWPDTPRKQATYLFLLPIVFPLWLTVPDVRNQKSRKFFVFTFLGSIMWIAIF
SYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNI
FDITMGLPIPWLMYSFIHGLAPVAVSSNGLFCAIVLLFLMLLFVIISIAACKWKMNKVLG
FTMFLLYFIFLVLSVMLEDRIIICPVSI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtacaagaaggaagcggctccagctgagccgggttctgtttctcctctccggg
gttttcctttgcaccctctatcagctcaccatcagtgccagactgcaacaacccatgtca
gtggctcagatcggagacgattttggagagggttcgacagagggtgtagaggaggccccg
gcagaaactggagggttggaggaaccttttactgttgaacctgaattagagcgtacagat
caaacaacatcaacccatgtgattcctcatactgacaagggtatggttaaaaatacagat
actgatgcaactaagccacccacttccacagaatctccactattaccaaccacaaaccgg
actattgtgcattgcatctatgtggcccctgaacctcctttggtgacaccaacacctgtt
ccagctccaccaactacaaccgcctccccagctccacctggtgaagctcctcatgttaaa
ggggaataccctgaagatatcttctctatcgaagatcgcagacgaggatgggtgatcctt
cacattttagggatgatgtacatgtttgtctccctcgcgattgtctgtgatgagttcttt
gtgcctgcactgggggtaatcacagacaagctcgccatctctgatgatgtagcaggagcc
accttcatggctgccggaggctctgcacctgaactattcacctccttgataggagtcttc
atcgcccacagcaacattggaatcggcacaattgtcggctcagcagtttttaacattttg
ttcgtaattgggatgtgcgctttgttttctcgagagattctccacctaacctggtggccc
cttttcagagacgtctcattttacatactcgacctcatcttactgatcatcttcttcttg
gacaatgtgataatgtggtgggagagcatgatgctggtggcatgttacagtctctatgtt
gtcttcatgaaattcaacgtacaattagagcgagaattcaagacccagctccacaaacac
aagagcattgtgaaggttattgctgtggaggaacctgagaagacaaatggggaaggtgaa
gataatgcccctcctgctccagaggacaagaatcggttaaagctgaagccatcccttcag
cgagggggaagttctgcttctttacacaacagcaccatgcgaaacaccatcttccagctc
atgattcacacattagaccctctgggagatggaaaatttaaggataaggttgagacgctg
aacaatgtggctagacggaagtcagtgtccaaaccccaagacaaaagtgaagctaaaggt
gggacaattgaagagaccaaagagccagaggctgccccagccaaagatgcggaaaagaag
gagcagccagaagaaaagaaggtactccccacccatgacctgctggctttcaaaaaaccc
agaagtcagtctttgatacctgtctatgatgacgtgccagcagaacaaggtggatccgaa
gactcagacaattctgacagtgaggaagatgacagcgaggaagatgacagcgaagaggag
agcgatgagtctagtgaagaggaggacaaggaggaggataaagaggaggaagagggggaa
aaagaagatgaccctctgtctttacagtggcctgacacacctcgaaaacaagccacctac
ctcttcttgttgcccatagtcttccctctgtggctcacagttcctgatgttcggaaccag
aaatccagaaaattctttgtattcacctttctgggctccattatgtggattgctatcttc
tcctacctcatggtgtggtgggcccatcaggtgggagaaaccatcggcatctccgaggag
attatgggcctgacaatcctggcagcaggaacctccatcccagacctcatcactagtgtg
attgtggcccgtaaaggcctaggagacatggcagtgtccagctctgtaggcagtaacatc
tttgacatcactatgggcctacccatcccatggctcatgtactctttcatccatggctta
gctccagtggctgtcagcagcaacgggcttttctgtgccatcgtgctgcttttcctcatg
ctcctctttgtcatcatctccatcgcagcctgtaaatggaagatgaataaggtgctgggt
ttcaccatgtttctcctctactttatcttcctggtgttgagtgttatgctggaagatcgg
atcatcatctgccctgtttccatctga
DBGET
integrated database retrieval system
