Cyprinodon variegatus (sheepshead minnow): 107101690
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Entry
107101690 CDS
T06110
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107101690
04082 Neuroactive ligand signaling
107101690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107101690
Ion channels [BR:
cvg04040
]
Ligand-gated channels
GABA-A
107101690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
DUF5874
Motif
Other DBs
NCBI-GeneID:
107101690
NCBI-ProteinID:
XP_015256182
Ensembl:
ENSCVAG00000017825
UniProt:
A0A3Q2D8S7
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MTWPVLSLLLLLGCQNSFGQQTSEAQKDAGSNEDSMVFTRILDGLLDGYDNRLRPGLGEN
VTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGPMEMLPLNNLLASNIWTP
DTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKF
GSYAYPVSEVVYTWTQGAAKSVVVAEDGSRLNQYHLVGQTADTEDIHTSRGQYTVMMAHF
YLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSL
PKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKALEAQHPKKRDPMVLS
KKANNVCSAGVNYTPNLTKDVSISTISNTTSVQLRGSESKLVDPKKTYNSVSKIDKMSRI
VFPVLFGTFNLVYWATYLNREPMVKGVVAST
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacttggccggtactttccctcctgctcctgctcggatgccaaaacagctttggtcag
cagacttcggaagctcagaaagacgcgggctccaatgaagacagcatggtattcacacgc
atcctggatggacttctggacggttacgacaacaggctgcgcccaggactcggagagaat
gtaacagagatcaagacaaacatctttgtgaccagcttcggccccgtgtccgacacagag
atggaatacactatagatgtgttctttcgacaaagctggaaggatgagcgcctctgcttc
aaagggcccatggagatgctgcctttaaacaacctcctggccagcaacatctggactcct
gataccttttttctcaacggcaagaagtccattgcgcataacatgaccacacccaacaag
ctgctgaggctaaaggacgacggaaccctgctttacacaatgaggttgaccatctcagca
gaatgccccatgcagttggaggacttccccatggatgcccacgcctgtccactcaagttt
ggcagctatgcctacccagtatcagaggtagtctacacatggacccaaggagctgccaag
tctgttgtggtggcagaagatggttctaggctcaaccagtaccatctagttggacaaacg
gctgacacagaggacatacacaccagcagaggacagtatactgtgatgatggcacacttc
tacctgaagaggaaaatcggatatttcgtcatccagacgtacatgccatgtttcatgact
gtaattttgtcccaagtgtcgttttggcttaacagagagtctgttcctgcacggaccgtc
ttcggtgtgactacggtgttgacgatgaccacactcagcatcagtgccagaaactcactt
cccaaagtagcctacgccacagccatggactggttcattgctgtctgctatgcttttgtc
ttttctgctcttattgagtttgccactgtgaactacttcaccaagaggagctgggcctgg
gatggcaagaaagctctagaagcacagcaccctaagaaaagagacccgatggtactctcg
aaaaaggccaacaatgtctgctcggctggcgtcaactacacccccaacctcaccaaagac
gtgtccatctccaccatctccaacacaacgtcggtgcaactgcgaggctcagaaagcaaa
ctggtggaccccaagaagacgtacaacagtgtcagcaagatcgacaagatgtcacggata
gtgtttcctgtcctcttcggaaccttcaacctcgtctactgggccacatacctgaacaga
gaaccaatggtgaaaggagttgtagcctcaacataa
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