Cyprinodon variegatus (sheepshead minnow): 107101738
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Entry
107101738 CDS
T06110
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107101738 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107101738 (neil1)
Enzymes [BR:
cvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
107101738 (neil1)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107101738 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
VIR_N
Motif
Other DBs
NCBI-GeneID:
107101738
NCBI-ProteinID:
XP_015256244
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MPEGPELHLASLYVNKMCEGVVFSGPVVKSEVSKSPDVSFNCESYRITASSRGKEVKLTL
TPIKSDDDGKRRSKVTQTDQPMDIVFRFGMSGYFRFTSEDEVPKHGHLRFYTKEKPCRVL
SFVDARRFGSWQPNGTWQPDRGPCIMFEYKSFRSVIGLQLTIILKIDRRFFPFCLRLNIP
PFLCARDALEGLELEDEFENKKPLKKEPTKTEIPDRAKMKGKTQGMGDLLRLCHTVPLEV
VSLGGKGYDPEKVDYSAFQAWLQCYYVDGMKSVRDHNGRTMWFKGDPGPMAPKDSKSPKA
KKRAKKGDDHDYTAKKKVTKSVMESTMKRRAVKKEMPKKETVHVKDTVSKKGNAEKKQEG
IQQRKTRESTRERKSSSAQPPGGRETRSGRATRKNSK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgccagagggtcctgaactccacttggccagcctgtatgttaacaagatgtgtgaagga
gtggtcttcagtggaccagttgtaaaatctgaggtcagcaaaagccctgatgtgtccttc
aactgtgagtcgtaccgcatcacagcttcttcgagaggaaaggaagtcaagctcacacta
acaccaattaagagtgacgatgatggaaagcggcgatcgaaggtcacacaaacagatcaa
cccatggacatagtctttcgttttgggatgtctggttacttccgctttacctcagaggat
gaggtgccaaaacacggccatctccgtttctataccaaggaaaagccttgcagggtactg
agttttgtagacgcacgcaggtttggcagctggcagcccaacggaacctggcagcctgac
agagggccttgcatcatgtttgaatacaaaagcttcaggtctgtaatagggctgcaacta
acgattattttaaaaatcgatcgccgtttttttcctttttgtcttaggttgaatatccca
ccatttctgtgtgcacgggatgcactggaaggccttgagttggaggatgaatttgagaac
aagaagcctttgaaaaaggagcctacaaagacagagatcccagacagagctaaaatgaaa
gggaaaacacagggaatgggtgacctgctcagactctgtcatacagttcctttagaggtg
gtcagcctaggtggtaagggctacgaccctgagaaggtggactactctgccttccaggcg
tggctgcagtgttactatgtggatggaatgaaatcagttcgggaccacaatggcagaaca
atgtggtttaaaggagacccagggcctatggcacccaaagactcaaaatcacccaaggca
aaaaagagggcaaagaaaggcgatgaccatgattatacagccaagaaaaaggtgaccaaa
agtgtgatggagagcacaatgaaaaggagggcggtgaaaaaggaaatgccaaaaaaggaa
actgtacatgtgaaggacactgtatcaaagaaaggaaatgccgaaaagaagcaggaaggt
atccaacagaggaaaaccagagaaagcacacgcgaaaggaaaagcagcagtgcacaacct
cctggaggcagagagacacgaagtgggagagcaaccagaaaaaacagcaaataa
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