Cyprinodon variegatus (sheepshead minnow): 107101756
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Entry
107101756 CDS
T06110
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107101756
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvg03310
]
107101756
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107101756
Nuclear receptors [BR:
cvg03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
107101756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107101756
NCBI-ProteinID:
XP_015256281
Ensembl:
ENSCVAG00000014246
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MFDFMEFQVFAPGEIIDFYSASSPGCALQDLDQDQDLAAFFPELIGSGWPEHRCSQSVES
QSSTSSSSLDDLFASPPSPPPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSVQKN
MVYTCHRDRNCIINKITRNRCQYCRLQKCFAVGMSKESVRNDRNRRKGKKEAVKMTIMET
YELTAELGLIVEKICRAHRETFPSLCQLGKYTTVSNSSSDHRIQLDLGLWDKFSELATKC
IIKVVEFAKRVPGFTGLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRT
QIHNAGFGPLTDQVFTFAGQLLPLEMDETESGLLSAICLVSGDRQDLEEPSKVEVLQEPL
LEALKIYSRKRRPSMPLMFPKALMKITDLRSISAKGAERVVTLKMEIPGSMPPLIEEMME
DLQNLESSQHSHTISSHSQRTNHPCLPV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacttcatggaatttcaggttttcgctccaggagaaatcatagatttttactcg
gcttccagtcctggctgcgcgctgcaggatctggaccaggaccaggatttggcagcattc
ttcccagagctcattgggtcgggctggccggagcatcgctgctcgcaatcagtggaaagc
cagagctcaacctccagctctagcttggacgacctatttgccagcccaccctccccacct
ccacctccgcgcacatacaagccctgttttgtgtgtcaggataagtcctcgggctaccac
tatggagtcagcgcctgtgagggctgcaagggtttctttcgccgcagcgtgcagaaaaac
atggtctacacctgtcatcgtgacagaaactgtatcatcaacaagatcaccaggaaccgc
tgtcagtactgccgcctgcagaagtgctttgctgtgggaatgtccaaagaatcggtgaga
aacgacagaaatagaagaaagggaaagaaggaagcggtaaagatgaccatcatggagacg
tacgagctgacagcagagcttggactgatcgtggagaagatctgcagagctcatagagag
accttcccttccctctgccagctgggaaaatacaccactgtgagtaattctagttcagac
catcggattcagctggacctcggcctgtgggacaaattcagcgagctcgccactaagtgc
atcatcaaggtggtggagtttgccaagagagtgccgggcttcacaggcctaacaatcgct
gatcagatcactctgctcaaagccgcctgccttgacatcctgatacttaggatttgcact
cgctacactcctgaccaggacaccatgaccttttctgatggactgactctgacccgcact
caaatccacaatgcagggttcggaccgctgacggatcaggttttcacatttgctggacag
ctgctgcctctggagatggacgagacagagagcgggctcctcagtgctatctgcctcgtg
tccggagatcggcaggacctggaggaaccttctaaagtggaggtgctgcaagaaccactg
ttggaggcgttgaagatctactcgcggaagcgacgacccagcatgcccctcatgttcccc
aaagccctaatgaagatcactgaccttcgtagcatcagtgctaaaggagctgagcgggtg
gtgacattgaagatggagatcccaggctccatgcctcctttgattgaagagatgatggag
gatctgcagaacctggagagcagccagcactcacacaccatctcctcccactctcagcgt
acaaaccatccttgtctcccagtctga
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