Cyprinodon variegatus (sheepshead minnow): 107101858
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Entry
107101858 CDS
T06110
Symbol
pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107101858 (pkd2)
04040 Ion channels [BR:
cvg04040
]
107101858 (pkd2)
Cilium and associated proteins [BR:
cvg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107101858 (pkd2)
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107101858 (pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
107101858
NCBI-ProteinID:
XP_015256421
Ensembl:
ENSCVAG00000011075
UniProt:
A0A3Q2E188
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MSSSRVRPQSQAGRSPRAAGSSEGIEMENIQHPDMALGGNIGAPSPPSRQAWSRDNPVFE
PEEEILEADWPQASPGRRSVSTASSGSSSSGSAHITRGGLYPTPTPTIHGRQQDRRQPRS
CLKHILQKIRTLWGTELMEDGDSSRERYLRNVLREMLTYVGFLITVCVLTYGMVNSNMYH
YTKVMSQLFLDTPLSPGEPTTFRSLSTMEDFWKFTQGPFLSGMYWEVWYNNKSLPENQSF
IYYENLLLGVPRLRQVKVRNESCSVHQDLRDELHDCYNIYTPSNEDTAPFGPKNGTAWVY
TPESEMNSSSHWGQVSKYGGGGYYQDLSRTKEESANHLQLLKDNLWLDRGTRAVFLDFSV
YNGNINLFCIARLLVEFPATGGAVTSWHFQTVRLIRYVSSWDYFVCVCEVAFCLFILYYV
VEEVLEIHIHRLHYFKSMWNCLDVLIVVFSVVAIIMNITRTAMARNLLGGLLENYSAHPS
FEALANLQVQFNNMAAVIVFFSWVKLFKFINFNKTMSQLSTTMSRCAKDLVGFAIMFFII
FLAYAQLAYLVFGTQVDDFSTFQASVFTQFRIILGDFDFSEIEEANPVLGPVYFTTFVFF
IFFILMNMFLAIINDTYSEVKADMSQQRSEMEMTDLIKKGCNKALMKLRLKKTPVDPISN
GLQQAGAKMNFDELRQDLKGKGHTDAEIQAIFAKYDQDGDPELTEHEHQQMRDDLEKERE
DLEMERNSLTRPSSGRSFPRTQDDSEEDDDEDSGHSSRRRGSSSGGVSYEEFQVLVRRVD
RMEHSIGSIVSKIDAVIVKLEGMERAKLKRRDVLGRLLDGVIEDERLGRDTDVHRDQMER
LVRDELELWESDDLGSQVSHTPAGPRARPPSSLSADGLDVSSNGGAHV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctctcgggtcagaccccagagccaggcgggcaggtcgccccgagcagcgggc
tccagtgaggggatagaaatggagaacatccagcacccagacatggctctgggaggaaac
atcggtgcaccgtctccaccatccaggcaggcgtggagccgagacaacccggtgttcgag
ccggaggaagaaatcctggaggcggactggcctcaggcgagtcccgggcggaggtctgtg
tccacggcctccagcggcagcagcagcagcggcagcgcccacatcaccagaggggggctg
tacccaacaccgacccccaccatccatggccggcagcaggacaggcggcagccccgcagc
tgtttgaagcacatcctccagaaaatcagaactctgtggggaactgagctgatggaggac
ggcgacagcagcagagaaaggtacctcagaaacgtgttgagggagatgctcacatatgtc
gggttcctcatcactgtctgcgttctgacgtatgggatggtgaactctaacatgtaccat
tacaccaaagttatgtcccagcttttcctggacacaccactgtctcctggggagccaact
acatttaggagcctctccaccatggaggacttctggaagttcacccaggggcccttcctc
agcggcatgtactgggaggtgtggtacaacaacaagagcctgcctgaaaatcagagcttc
atctactatgagaaccttctcctcggcgtaccgcgactccggcaggtcaaggttcgcaat
gagtcctgctctgtccaccaagacctgagggatgagcttcatgactgctataacatatac
acccccagcaatgaggacaccgccccctttggtccaaagaatggaacagcgtgggtgtac
actccagagagtgagatgaacagcagcagccactgggggcaggtgtcgaagtatggaggt
ggagggtactaccaggacttgtcccgaacaaaggaggagtcagctaaccatctgcagctt
ctcaaagacaacttgtggctggacagaggcaccagagcagtcttccttgacttctcagtc
tacaacgggaacataaaccttttttgcattgcaaggttgctggtggagtttccagccacc
ggaggagccgtgacctcctggcacttccagacggtgcggctgatccgatacgtgtccagc
tgggactacttcgtctgtgtgtgtgaggtggccttctgcctcttcatcctctactatgtg
gtggaggaggttctggaaatccatatccaccggctgcactacttcaaaagcatgtggaac
tgtctagatgttctgatcgttgtgtttagtgttgtcgccattataatgaacataaccaga
acagccatggctcgaaatctgctcggtgggctgttggagaactactcggctcaccccagc
ttcgaggctctggccaacctccaggtccagttcaacaacatggccgcggttattgtcttt
ttctcctgggtcaagctgtttaagttcatcaacttcaacaaaaccatgagccagctgtcc
accaccatgtcccgctgtgccaaagaccttgtgggcttcgccatcatgttcttcatcatc
ttcctggcatacgctcagctcgcctacttggtgtttggaactcaagttgatgatttcagc
accttccaagccagcgtgttcacccagttccgcatcattctgggcgactttgacttctca
gagatcgaggaggcaaacccagtccttggaccggtttattttactacgtttgtcttcttt
atattctttatattaatgaacatgttcctggctataatcaatgacacatactctgaggtg
aaggctgatatgtcccagcagaggtctgagatggaaatgacggacctcatcaagaagggc
tgcaacaaagctttgatgaagctaaggctgaagaaaacgcccgtggatcccatttccaat
ggtttgcaacaagcaggcgctaaaatgaactttgatgagctccgtcaggatctgaaagga
aaaggccacacggacgcagagattcaagccatcttcgccaagtacgatcaggacggcgac
cctgagctgacggagcacgaacaccagcagatgagagacgacctggagaaagagagagag
gacctggagatggagcgcaattctctgacccgacccagcagtgggcggagcttccctcgc
actcaggatgactcagaggaggatgatgatgaggactctggtcacagctcccgtcgccgt
ggcagcagctctgggggagtctcctacgaagagttccaagtgctggtgaggagagtggac
cgcatggagcactccatcggcagcatcgtgtcgaagatcgatgcagtgattgtgaagctg
gagggaatggagagagctaagctgaaaagaagagatgtgctgggcaggctgctggacgga
gtcatcgaggatgagcgtttgggtcgggacactgacgtccacagagaccagatggagcga
cttgtgagggacgagctggagctttgggagtcagacgacttgggctcccaggtcagccac
actcctgcgggcccacgggctcgtcccccgtcctccctttctgcagacggcctcgacgtg
agctcaaatggaggcgcacatgtctaa
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