Cyprinodon variegatus (sheepshead minnow): 107101887
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Entry
107101887 CDS
T06110
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04142
Lysosome
cvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107101887
04142 Lysosome
107101887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107101887
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107101887
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107101887
Exosome [BR:
cvg04147
]
Exosomal proteins
Proteins found in most exosomes
107101887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
Motif
Other DBs
NCBI-GeneID:
107101887
NCBI-ProteinID:
XP_015256450
Ensembl:
ENSCVAG00000010283
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPSG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVKRKNPELWASV
LLETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGMVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
NHPSDAWKEGQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKVKQLPLVKPYLRSVQNHNNKAVNEALNNLFINEEDYAALRTSIDAYDNFDNISLAQSL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLAWFLQ
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDK
LEASESLRKQEEQATDSQPIVYGTPQLMLTAGPNMAVPPQQAYGYGYTAAPAYGQPPQAG
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgcttccaggagcacctgcagctccagaacctggggatc
aacccagccaatatcggcttcagcacacttaccatggaatctgacaagttcatctgcgtg
agggagaaagtgggcgagcaggcccaggttgtcatcattgatatggccgatcccaataat
cccatccgccggcccatttctgctgacagtgcaatcatgaaccctgccagcaaagttatt
gcccttaaagacgctgcaaagaccctgcagatttttaacattgagatgaaaagcaagatg
aaggctcacaccatgacggatgacgtgactttctggaagtggatctctctcaacaccgtt
gcactggtcacagacaacgccgtgtaccattggagcatggaaggcgactcccaacccatc
aaagtgtttgaccgtcactccagcctggcaggctgccagatcatcaactaccgcactgat
gccaaacagaagtggctgcttctcattggaatttcagcacagcaaaaccgtgttgttggg
gccatgcagttgtactctgtggatagaaaggtctctcagcccattgaaggccacgctgct
ggctttgcacaatttaagatggagggcaacactgaggaatcaactctgttctgctttgct
gttcggggacaagcaggaggaaagctccatattattgaagttggaaccccgccgagtgga
aaccaaccgtttcctaaaaaagccgtggatgttttctttcctcctgaagcccagaatgac
ttccccgttgctatgcagatcagttcaaagcaggatgttgttttcctcatcacaaagtat
ggttacatccacctgtatgatctggaaaccggaacctgcatctacatgaacaggatcagc
ggggaaaccattttcgtcacagccccacatgaacccaccgctggtatcattggagttaac
aggaaaggacaggtactgtcggtgtgtgtagaggaagaaaacataattccctacattacc
aatgtgctccagaacccagacctggctctccgtatggctgtacgcaacaacctcgctggt
gctgaagaacttttcgcccgcaaatttaacaccctgtttgcggcagggaattactcagaa
gcagcaaaggtggcagccaatgcccctaagggcatcctgcggactccagacaccattcgt
cggttccaaagtgttccagcccaaccaggccagacctcccctttgcttcagtacttcggc
attctgctggaccagggccagctgaataagtttgagtctctggagctatgcaggcctgtg
cttcagcagggccgcaagcagctactggaaaaatggctaaaggaggacaagctggaatgt
tctgaggagctgggagacctggtgaagtctgtggatcccactcttgccctcagtgtgtat
ctcagagcaaacgtccccaataaagtcattcagtgcttcgcagagactggacagttccag
aagattgttctctatgccaaaaaggtgggctacacacccgactggatctttctgctgagg
aatgtaatgcgaatcagtcccgaacaaggactccaattctcccagatgttggttcaggat
gaggaaccacttgctgacatcacacagattgttgacgtattcatggagtacaacctgatc
cagcagtgcacgtcattcctacttgacgctctgaaaaacaacagacccatggaagggcca
ctgcagacacgcctactggaaatgaacttggtccacgcaccacaggttgctgatgccatc
cttggcaatcagatgttcacccactatgaccgtgcccatgtcgctcagctgtgtgagaag
gctggcctcctgcagagggcgctggaacactacacagacctgtatgacataaagcgagct
gtggtgcacacccaccttctcaacccggagtggttggtgaatttcttcggctccctctca
gttgaggattctttggagtgtctgagagccatgctgtcagccaacatccgccagaaccta
cagatctgtgtgcaggttgcctccaagtaccatgaacagctgaccactcagtccctcact
gaattgtttgagtcatttaaaagctttgaaggattgttttacttcttgggttctattgtg
aacttcagtcaggatccagaagtccactttaaatacattcaagctgcctgtaaaaccggc
cagattaaagaggtggagagaatctgcagagaaagcaactgctacgacccggaacgggtg
aagaacttcctgaaggaggccaaactgactgaccagctgcctttaatcattgtctgtgac
cgcttcgattttgtccatgacctggtcctgtacctgtatcgcaacagccttcagaaatac
attgaaatctacgttcagaaggtgaacccaagccgtctgccagtggttattggaggtttg
ttggacgtggactgtgctgaggatgtgattaagaacctgatcatggttgtcagggggcag
ttttctacagatgaacttgttgctgaagtggagaaaagaaatcgtctgaagttgttgctg
ccctggttggaggcccgtattcatgaaggttgcgaggagcctgcaactcacaacgctttg
gccaagatctacatcgacagtaacaataacccggagcgttttttaagggagaacccatat
tacgacagccgtgtggtgggcaaatattgcgagaagagagacccccacttggcttgtgtg
gcgtacgagagaggacagtgtgaccaggaactcattcatgtgtgcaatgaaaactcactg
ttcaagagtctctcccgctacctcgttaaacgcaagaaccccgagttatgggcaagtgtc
ctgctggagaccaacaactacaggagacctctcatcgaccaggtggtccagactgcctta
tcagaaactcaggatccagaggaagtgtctgtcacagtcaaggctttcatgacagctgac
ctgcccaatgagctcattgagcttctggaaaagattgtgctggacaattctgtgttcagt
gagcacagaaacctccagaacctgctcattctaacggccatcaaagcggaccgaactcgt
gttatggagtacattaatcgccttgacaactatgatgccccagacatagcaaacattgcc
atcagtaatgagctgtttgaggaggcctttgcaattttcaggaagtttgatgtcaacacg
tctgctgtgcaggttctgattgagcacattgggaacctggacagagcatatgaatttgca
gagcgttgcaatgagcctccagtgtggagccagctggcaaaggctcagcttcagaagggg
atggttaaagaggccatcgactcctacatcaaggctgatgacccatctgcttacatggag
gtgggacaggctgcagcccaaagcggaaactgggaggacctcgtcaagttcctgcagatg
gctcgtaagaaggcccgcgagtcgtatgtggaaacagagctgatctttgctttggccaaa
accaatcgcctggcagagctggaggagttcatcaacggtcccaataatgcccacattcag
caagtgggcgatcgttgttacgacgacaagatgtacgaagcagccaaactgctttacaac
aacgtgtccaactttggccgtctggcttccactttggtgcacttgggagaataccaggca
gctgtggacggagcacgcaaggccaacagcacccgcacctggaaggaggtttgtttcgcc
tgtgtggatgggaaggagttccgtctagcccagatgtgcggtctgcacatcgtcgtccat
gctgacgaactggaggaattaatcaactactaccaggaccgcggttactttgaggagctg
atcaccatgcttgaggctgcgctgggcctggaacgtgcacacatgggaatgttcacggag
ctggccatcctttattccaagtttaaaccccagaagatgagggaacacctggagctcttc
tggtctcgtgtcaacattcctaaagttctcagggcagctgaacaggcccacctctggggt
gagctggtgttcctctacgacaagtacgaggagtatgacaacgccatcatcaccatgatg
aaccatccatctgacgcctggaaggagggccagttcaaagatattgtcaccaaggtggct
aatgtagagttgtactacaaggccgtccagttttatctggaattcaagccgttgttactg
aatgatctgctcatcgtgctctctccgaggctggaccacacgcgtgctgtgaacttcttc
agcaaggtcaaacagctgcctctggtcaaaccgtacctgagatcggtccagaatcacaac
aacaaggcagtgaatgaggcactcaacaaccttttcattaatgaggaagactatgcggca
ctgcgaacatccatcgacgcatacgataactttgacaacatctcactggctcagagcctg
gagaagcatgagctgattgaattcaggaggattgcagcttaccttttcaagggtaacaac
cgttggaaacagagcgttgagctctgcaagaaggacaagctctacaaggatgccatgcag
tatgcatcagagtccaaagacatagagctggctgaggagctcctagcctggttcctgcag
gaagacaagaaggagtgttttgccgcctgcctgttcacctgctacgacctgctgcggcca
gatgtggtgctggaaaccgcctggcgacacaacatcatggacttctccatgccatacttc
atccaggttatgagagagtatctctctaaggttgatgcgataaaggaaaaggtggacaaa
cttgaagcctctgagtctctgaggaaacaggaggagcaggccacagactcacaacccatt
gtttacggcacaccccagctaatgctcacagcagggcccaacatggccgtgcctccacag
caggcctatggctacggctacacggctgcaccagcctacggccagccgccacaggccggc
tttggttacggcatgtga
DBGET
integrated database retrieval system
