Cyprinodon variegatus (sheepshead minnow): 107101979
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Entry
107101979 CDS
T06110
Name
(RefSeq) plakophilin-3-like isoform X1
KO
K28841
plakophilin 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04382
Cornified envelope formation
cvg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
107101979
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107101979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
Atx10homo_assoc
ARM_ARMC5
V-ATPase_H_C
ARMC9_ARM
WRM1_C
MOSP_N
Cnd1
BAR1_C
Motif
Other DBs
NCBI-GeneID:
107101979
NCBI-ProteinID:
XP_015256570
Ensembl:
ENSCVAG00000006861
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MSMLTPENTFLSSLQPHTPSTTYALPSDNQLGNGSTMADEQLRSRRVQEQVKMKLAEKST
LPRQNGAASHYAMSDYGGSSTMKYSTYSPSFSSKSSYMYSGSKTMAPQISHRAGYSSRSA
APEVVGFQKMSIGVSGGGGGGFYREDMRSGGFQASMRPHQMEHDAMSLHSVKNVPAVRSW
VIESDAGSLQSDQEATFSRQGTMNGYSTQMRQGGGNVAYQSQFQAQAPAGVSMLRSQSGT
LTRGGTMTGGGSEILQQQYSFKGPAHRTISRITNRNRMSVGSLSGTQMTNSAGNLMGGRD
QVDRGFIVSTLGSGSQGNLLQRQGNLSRSMSIRSMQSVGRGMDVFGQMEDLDHLQGVADL
NIATAVEYLRSGDPSLETMGAAFVQHMCYNEKEAKDQVRQHGAIKDIVDLFNSENTEVAR
YATGAARNLIYENNDNKNALIELNGIAALNEALKENDDELYKNITGILWNLSSKDKFKEI
IAKETLSGLSEKILVPAAEREEQLKHESEDYTPNHTSSPSVDEIFTNTTGCLRNLSSGNE
KTRQQMRETKGLVGSLVRCLRGSVDNGKTEEKGAENTMCILRNLSYQIYNELPPSYQMRL
NRKVETDKSSGTVGCFSPNSKKTNKDSNRLIYQEITKDPKDMEWLWHPNIVTLYQSVLQS
CEINATTREAAIGSLQNITSGEGQWAAELSRFAVEQRKILPKLMDLLRTDRNKELLSLSG
LLRNLARHSNVSSTLDQVVNKLPTDGKMKDPSAEVVVNLCGILNSMVMKDFDATKRICEN
GGLERLMAVKKTTDSRSGLCRLILNMTQVKVTLCNYLPLGALDL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgttgaccccagaaaacacgtttctgtcttccttacagccccacaccccatcc
accacttatgcgctcccgtcggacaaccagctcggcaatgggagcaccatggccgacgag
cagctgaggagccggcgggtccaggagcaggtcaagatgaagctggcggagaaatccaca
cttccgcgtcagaacggagcggcctctcattacgccatgtcagactatggtggttcatca
acaatgaaatacagcacctacagcccaagcttcagctctaaatcctcctacatgtactca
ggctctaaaacaatggctcctcagatttcccacagggcgggatacagcagcaggtccgca
gccccagaagttgtcgggtttcagaagatgagtataggggttagtggtggcggtggcgga
ggtttttaccgggaagacatgcgttctggcggctttcaggcatccatgagaccacaccaa
atggaacatgatgccatgtctcttcactcggtgaaaaacgtgcctgcagtgcgttcatgg
gtaatagagagcgatgctggaagcctgcaatctgatcaggaagccaccttcagccgccag
ggcacaatgaatggctacagcacccagatgaggcaaggaggaggcaatgtggcctatcag
agccagtttcaggcccaggcaccagctggtgtctcaatgcttcgaagccaaagtggcact
cttacccgtgggggtactatgacaggaggaggttctgaaatcctccaacagcaatattcc
ttcaaaggcccggctcaccgcaccatcagcaggattacaaaccgtaaccggatgagcgtt
ggctcgctgtctgggacccagatgaccaatagcgcaggcaacttgatgggaggacgagat
caggtggacagagggtttatcgtgtcaaccctcggatccggatcccagggaaatctgttg
caacgccaaggtaacctgtcccgatccatgtcgatcagaagcatgcagagcgttggcaga
ggcatggacgtttttggccagatggaagacttggaccacctgcaaggagttgccgatctg
aacattgcaactgcggttgagtacctgagaagcggtgacccctcgctggagaccatgggt
gcagctttcgttcagcatatgtgctacaatgaaaaagaagcaaaagatcaggtgcggcag
cacggcgccattaaggatatagtggacctgtttaacagcgaaaacacagaagtggcccgt
tatgcaacgggcgctgctcgcaacctcatctatgagaacaacgacaacaagaatgccctg
attgaactcaacggcatcgctgcgcttaacgaggcgctaaaagagaatgatgatgagctt
tacaaaaacatcacaggtattctgtggaatctctcctccaaagacaagtttaaggagatt
atagccaaggagacacttagcgggctctctgagaagatcctcgttcctgctgctgagcga
gaggagcagctgaagcacgagagcgaggattacacgccgaaccacacaagttctccatct
gtggacgaaatattcaccaacacaaccggatgcctaaggaatctgagctctggcaatgag
aaaacccgtcaacagatgcgagaaaccaaagggctagtcgggtctttggtgagatgcctt
agagggtccgttgacaatggaaagacagaagaaaagggtgcggagaacacaatgtgcatc
ttgaggaacctctcctaccaaatctacaatgaacttccaccatcttaccaaatgcgtttg
aacagaaaggttgaaacggataaatcgtctggcactgttggctgcttttctccaaacagc
aaaaaaaccaacaaggacagcaatcgcttgatataccaagaaataacaaaggatccaaaa
gacatggagtggctgtggcaccccaatatagtgactctgtaccaaagtgtgctgcagtca
tgtgaaattaacgccaccacccgagaggcagccattggaagtctgcagaacatcacttct
ggagaggggcagtgggctgcagagttaagcaggtttgctgtggaacagaggaaaattctg
ccaaaattgatggatctcctgcggacagacaggaataaggagctactttctctcagcggc
ctgttgaggaatttagctcgtcacagtaatgtctcgtcgacattggaccaagtggtaaac
aagttgcctactgatggcaaaatgaaggacccttctgctgaagtggtggttaacctctgc
ggtatcctcaatagcatggtgatgaaagattttgatgctaccaagagaatctgtgagaac
ggaggcctggagagactgatggcagtcaaaaaaacgacggactcaaggtctggtttgtgc
cggttaatcctaaatatgacacaagttaaagtgacgctgtgtaactatctgccactaggg
gcgctagatctgtaa
DBGET
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