Cyprinodon variegatus (sheepshead minnow): 107101990
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Entry
107101990 CDS
T06110
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107101990 (rlim)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107101990 (rlim)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107101990 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Polyoma_lg_T_C
Motif
Other DBs
NCBI-GeneID:
107101990
NCBI-ProteinID:
XP_015256585
Ensembl:
ENSCVAG00000019216
UniProt:
A0A3Q2EFR0
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MEGSDSVEQGSGDQSESQRRTQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGNPGEVT
EDELFNRLQQIKDGPEQPINNTPSPENSEDPVETPESSEDPQGGDSLLDWLNTVRRTGNT
TRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQGPSEQSPVVQEED
AAEPEPLVPMETETVEEPVVEEMAVVVQPEPEPEPEETAVEEVASQEAVEEPPSPAPPPA
PVAAAPSPEPSPEQPPPCSSPRRGQRRPRSCSPEPRRTRARLARSRSPLRLDQLDGLLGP
RHTYGPQSPSSSTDTPPAPQVEGSSRTRQHILSRPNPADDSAPPPSVEAESAPEAQEVRP
QEAESTGNEGGSAERRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESD
RGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYL
MDSDSDSSDSNRGTGTAADTDSLNNSDASNAEASAADEQPAAAAAAAGARERTVEADVDE
GLTTGPQGSAGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDDDQPQGLTKEQIDNLSMR
NFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSAN
RESVI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctgacagcgtggagcaaggcagcggtgaccagtcagagtcgcagcgcaga
acgcagttggatcgtctggacagagaagaggccttttatcagttcgtcaacaatctcagt
gaagaggattatcgccttatgagagacaacaatctcctgggaaatccaggtgaggtaact
gaggatgaactcttcaatagacttcagcaaatcaaagatggtccagagcagccgattaac
aacacccctagccctgaaaatagtgaagatcccgttgaaactccagagagctctgaggat
ccccaaggtggggacagcctgctagactggctcaatacagtgaggcggaccggcaacacg
actagaacaggacaccgtggaaaccagtcatggcgggctgtgagccagactaatcccaac
tctggtgattttcgctttagccttgagataagtgttaaccgcaacctggccgaacaacag
gcagccgctgagggagagcaggggccttcagagcagtccccagtggtccaagaagaagac
gctgcagaacctgagccgctggttcctatggagacggagacggtcgaagaaccagttgta
gaagaaatggctgtcgtcgttcaaccagaaccggaaccagagccagaagaaacggctgtt
gaggaggttgcttcccaagaagctgtagaagaacctcccagtccagctccccctccagct
ccagttgcagctgcaccctcaccagagccctcaccggagcaacccccaccctgttcttca
ccaaggaggggacaaaggaggccccgcagctgtagcccagaaccacgcaggacaagagct
cgtttagccagaagccggtcacccctccgtttggatcagcttgatggtctacttggtcca
cgacacacctacggtcctcaaagccccagttcttccaccgacacacctccagctcctcaa
gtggagggcagttctcggactcgtcaacacattctctctaggccgaacccagcagatgac
agcgctccaccacccagcgttgaagcagaatcggcccctgaggcccaggaggtccggcct
caggaagcagagtctaccgggaacgaagggggctcagcggagcgacgtccccctactatc
atgctcgatctacaggtgcggcgtgtgcgtccgggtgaatatcggcaaagagacagcatc
gccagccgtacccgatcacgctcgcagaactccaacaacacatttctctacgagagtgat
cgaggaggtttccgtaggaccttctcacgctcagagcgtgctggagtgaggacctacgtc
agcaccatccgaattcccattcgcaggatttcagacgcagggttaggagaggctacatcg
atggctcttcaatctatgataaggcagattatgacaggctttggagagctaggctacctc
atggactccgactcagattcttcagattcaaaccgcggtaccgggacagccgcggacacg
gacagcctcaacaattcagatgctagtaatgctgaggcgtccgccgctgatgagcaacct
gctgcagctgctgctgctgccggagccagagaaaggacagttgaggcggacgtagatgag
ggtctcaccaccggcccacagggttctgctggtagggctcgacccagaccccccatcagc
ctggaggagcccagctctcttcccttcctccgactcgctcacttcttcctcctgaacgac
gacgacgatgaccagcctcaggggctgactaaagaacagatcgacaacctctctatgcgc
aacttcggcgaaagcgacgccttgaagacctgtagcgtctgtataacggaatacgccgag
gggaacaagttacgcaagcttccctgctcccacgagtaccacgtgcactgcatagaccgc
tggctctctgagaactccacctgccccatttgtcgcagggctgttctggtatcagccaac
cgggagagcgtgatctaa
DBGET
integrated database retrieval system
