Cyprinodon variegatus (sheepshead minnow): 107102117
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Entry
107102117 CDS
T06110
Name
(RefSeq) endothelial cell-selective adhesion molecule-like isoform X1
KO
K06787
endothelial cell adhesion molecule
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecule (CAM) interaction
cvg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107102117
04517 IgSF CAM signaling
107102117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107102117
Cell adhesion molecules [BR:
cvg04515
]
Immunoglobulin superfamily
CTX family
107102117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
ig
I-set
Ig_2
TM_ErbB1
Ig_PDGFR_d4
C2-set_3
LEA-2_4
C2-set_2
Ig_C17orf99
Receptor_2B4
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
107102117
NCBI-ProteinID:
XP_015256779
Ensembl:
ENSCVAG00000003105
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MEIKRGLRAMLMVIWIFPGDTRKVEMPSREIEVVKGQMVVLQAWYSPSSDISQNTVIWHF
TGNDSKQVINFSSGKVGHGQNEFTNRVGFSVTMPSANLSIYINNTQETDSGLYFCHVIVP
GGHGISGELRLNVKVPPSPPLCSMMGNPVVKGNVTLSCKSSQGKPAPQYKWTRAAPSSEV
FFSPMQNERHGTLRLSNLTKGMSGKYICRASNTAGTDSCSINLEVITPSNAGMIAAATLG
SVVGLVAMMLILVFILKRRQDSEEEMANEIKEDAQAPKRVSWAKSNTGSDIVSKNGTLSS
VATSPRSQDPPKFPYPYSPVSASDTGSVINAYQLRPGTACSLQGLPGYNIGGTPIRKHKR
PPCANGGPPQILRSPAVGIPLKRTEGPQPQVPPPVTVSPQISSSTLTRMGAVAVMVPAQS
QAGSLV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggagataaagagaggacttcgagccatgctgatggtgatatggatctttccaggtgac
accaggaaggtggagatgcccagcagggagatagaggtggtgaaaggccagatggtggtc
ttacaggcctggtacagccccagctcagatatctcccagaatacagtcatttggcacttt
acagggaatgactccaagcaggtaattaactttagctcaggtaaagtcgggcatggacaa
aacgaattcaccaacagagtaggcttcagcgtgaccatgccttcagccaacctctccatc
tacatcaacaacacccaggaaaccgactccggcctgtacttctgccacgtcattgtcccc
ggaggtcacggcatttctggagagctgcggctgaacgtcaaagtccctccctcgccacct
ctctgcagcatgatgggaaacccggtggtgaaaggcaacgtgacactaagctgcaagtcc
agccagggaaaacccgcccctcagtacaaatggaccagagccgcgccctcatccgaggtc
tttttttccccaatgcaaaatgagagacacggcaccctcaggctcagcaacctcaccaaa
ggcatgtcagggaaatacatctgcagagccagcaacacggccggcactgacagctgctcc
attaacctggaggttatcaccccttccaatgctggaatgatcgctgcagcgaccctgggg
tctgtggtgggactggtggccatgatgcttatccttgtattcatactaaagaggagacag
gactcggaggaggagatggccaatgagatcaaggaggatgctcaggcaccaaagagggtt
tcatgggcaaagagtaacacaggctcagacattgtgtcaaaaaacggcaccctgtcctct
gtcgccaccagcccccgatcgcaggatccgcccaaattcccatacccatactctcccgtt
tcggcatcagacacaggctcggtgatcaacgcctaccagctgcgacccgggacggcctgc
agcctgcaggggcttcctggatataatatcggaggcactcctatacgcaaacacaagcga
cccccctgtgcaaacggagggcccccacagatcctcagaagccctgcggtcggcatcccg
ctaaaaaggactgaagggcctcagcctcaggttccccctccagttactgtgtccccacag
atcagctcctccactctgacacgcatgggggccgtagccgtcatggtgcctgctcagagc
caagccggctccctggtgtag
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