Cyprinodon variegatus (sheepshead minnow): 107102165
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Entry
107102165 CDS
T06110
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1
KO
K13885
scavenger receptor class B, member 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03272
Virion - Hepatitis viruses
cvg04145
Phagosome
cvg04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
107102165 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107102165 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
107102165 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107102165 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107102165 (scarb1)
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Phagocytosis
Scavenger receptors
107102165 (scarb1)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107102165 (scarb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD36
DUF4534
PorA
Motif
Other DBs
NCBI-GeneID:
107102165
NCBI-ProteinID:
XP_015256852
Ensembl:
ENSCVAG00000020210
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MAIEKSKIAIGFIVAGILMLLFGIITAIIGPTVMKNEVEKNTIIDPKNDLSYTMWRDLPV
PFFMSVYFFHVLNPEEILKGEKPMVEQRGPYVYRKQCQKENITFHPNSTVSYKEYRQYFF
EPSMSVGNESDVITIPNMLVLGAAVMLEDMPYAVRLLISATFKTFKEGPFLTKTVGELMW
GYDSDLVAFLNKYLPGMLPASGKFGLFSEFNNSNTGLFTIHTGRDDITKVHKVDSWNGLT
ELKYWKTPQCNMINGTAGQLWPPFMTKESTLNFYSPDACRSLELVYQRSGEMQGIPLYRF
VAPNTMFANGTDYPPNEGFCPCRQSGLLNVSSCRHNSPVFISHPHFFNADPALLDYVLGL
SPTEEEHGLFIDIHPLTGVPLNVSIRLQLNLYMKRVSGITETGKISEVVMPMLWFEENGY
IDGPILSTFKTQLVILPAVMEYMQYIFIALGLLTIVVAVFVFYKVKGKTSEGATVPREIT
STSTGERTPLLQVKKH
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggccattgaaaaatctaaaatagccattggatttatagtggcaggcattctgatgctg
ctgtttgggataattacagcaattattgggccgacagttatgaagaacgaggtagaaaag
aacaccatcattgatccaaagaatgacctctcctacaccatgtggagggacctcccggtg
cccttcttcatgtccgtctacttttttcacgtcctcaatcctgaagagatcctgaaagga
gagaagcccatggtggagcagagaggaccttatgtgtacagaaaacagtgtcagaaggag
aacatcacgtttcaccccaacagcacagtgtcctacaaagaatacagacaatacttcttt
gagccctccatgtctgtagggaacgagtcggatgtcatcaccatccccaacatgttggtg
ctgggtgcagcggtgatgctggaggacatgccctacgccgtgcggctgctgatcagtgcc
accttcaagactttcaaagaagggcccttcctgaccaagacggtgggagaactgatgtgg
ggctacgacagcgatctggtcgcgttcctcaacaaatacctgccggggatgctgccagcg
agtggaaagtttggccttttttcagagtttaataactcaaacactggattattcacaatc
cacactgggagagatgacatcacaaaggtccacaaagttgattcctggaatggattaact
gagctgaaatactggaagacgcctcagtgtaacatgatcaacgggacagccgggcagctg
tggccacctttcatgactaaagagagcactttaaatttctacagcccggacgcctgcaga
tctttggagcttgtttatcagcggtctggggagatgcaaggcatccctctatatcgattt
gttgcacctaacaccatgtttgctaacgggacagattaccctccaaatgaaggcttctgc
ccctgcaggcagtctggcttgctaaatgtcagcagctgccgccacaactcccccgtcttc
atctctcatcctcacttcttcaatgccgatcctgcactgctggactacgtgttgggtctc
agccctaccgaagaggagcatggccttttcattgacattcatccactcacaggcgtcccc
ctgaacgtgtccatccgcctgcagctcaacctctacatgaagagagtatcaggaatcaca
gaaacaggcaagatttcagaggtggtgatgcccatgctgtggtttgaggagaatgggtac
atcgatgggccgatcctctctacgtttaaaacccagctggttattctgcctgctgtcatg
gagtacatgcagtacatcttcatagccctcggcctgctaaccattgtagtggctgtcttt
gttttctacaaggtcaagggaaagactagtgaaggtgccactgtaccaagggaaatcacg
agcacttcaactggagaacgaacccctctgctacaagtcaagaaacactga
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