Cyprinodon variegatus (sheepshead minnow): 107102193
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Entry
107102193 CDS
T06110
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04140
Autophagy - animal
cvg04148
Efferocytosis
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107102193 (vps16)
04148 Efferocytosis
107102193 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107102193 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107102193 (vps16)
Membrane trafficking [BR:
cvg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107102193 (vps16)
Hops complex
107102193 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
107102193
NCBI-ProteinID:
XP_015256887
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MAFITANWNPLGDAFYRKTELYEMFWSLRDGLGDSLVAAAPYGGPIALLREPLRRSTSSR
PQLDIYSASGVSITSFPWKSGPVVHLGWSVNDELLCVQEDGTVLIYDLFGTFKRHFSMGQ
EVVQSQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIEDLKLRRLPEVPGLQGKPSCWVVL
TQDRQTKVLVSSGAELYVLDNTSCTAVYPPGLSPQAGSIVHMAVSFSYKYLALFTEAGHL
WTGLSNLQERLSEVDIKRTAPPTQMVWCRRPRSQQPSVVLMWDRLLLVVGACNDTIQFPM
EERSVLVGELDGVRIIAPCSQELLQEVPLVCQDIFKIASMAPGALLLEAHREYEKSSQKA
DEYLREIKEQDVLGDAVRQCVEAAAHEYDPDTQKALMRAASFGKCFLTDFSPEQFVVTCR
ELRVLNAVRDSSVGMPLTHTQFKQMTLQVLIDRLVYRQFYPLTMEVCRYLKIPDYQGVSR
VLKHWASCKVQQKDLTDEAIARAVCSKVGDCPGVSYSDIAAKAYECGRPELAIKLLDYEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQVGSAEPEGVGGPGWYPNRKMDQIPAHPWFLPFRFWWLKLKSLAEKEQWEELEKFSRS
KKSPIGYLAFVEVCMKNNNRHEAKKYVSKVTPEQKVKAHLAVGDLEGAADAAIERRNDSE
MGAVLSRCSASDRLLMDRLTRARAGAARK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggccttcatcaccgctaactggaacccgctgggagacgccttctaccggaagacagaa
ctttatgagatgttctggagccttcgggacggactgggagacagcctggtggctgcagcg
ccctatggaggtccaatcgctctcctcagagaacctctcagacgttccaccagttcccgt
ccccagttggacatctactcggcctcaggagtgtccatcaccagcttcccttggaagagc
ggtccggtggtccacctgggttggtccgtcaatgacgagctcctatgtgttcaggaggac
gggacagtcctgatctacgacctgtttgggacattcaagagacacttcagcatgggacag
gaagtggtccagagccaggttctggaggccaaggtctttcactctccctatggaactggc
gttgccatagtaacaggctcctcccgcttcaccctggcgaccaacatcgaggacctgaag
ctccgcaggttacctgaggtcccaggtctccaggggaagccgtcctgctgggtggtcctg
acccaggacagacagaccaaagtcctggtgtccagtggagctgaactctatgtcctggac
aacacctcctgcactgctgtgtaccccccaggtctcagtcctcaggctggcagcatcgtc
cacatggccgtctccttcagctataagtacctggctctgttcacggaggcgggacacctg
tggaccggcctgtccaacctgcaggaaagactgagcgaagtggacatcaaaaggacagct
ccgcccacacagatggtctggtgccgcaggcccaggtcccagcagccctccgtggtcctg
atgtgggacagactcctcctggtggtgggagcgtgtaacgacaccatccagttccccatg
gaggagcgctcggtgttggtgggggagctggacggcgtccggatcatcgctccctgcagc
caggagctgctgcaggaggttcctctggtctgccaggacatcttcaagatcgcctccatg
gctcctggagcgctgctgctggaggcccaccgcgagtacgagaagtccagtcagaaggcg
gatgagtacctgagggagatcaaggagcaggacgtcctgggagacgccgtgcggcagtgt
gtggaggcagcggcgcacgagtacgaccctgacacccagaaggctctgatgagggcggcg
tccttcggcaagtgttttctgacggacttcagtccggagcagttcgtggtgacctgcagg
gagctgcgggtgctgaacgccgtcagggacagcagcgtggggatgccgctcactcacact
caattcaaacagatgaccctacaggtgctgatagacaggttggtctaccggcagttctac
ccgttgaccatggaggtctgtcgctacctgaagattccagactaccagggagtcagccga
gtcctgaagcactgggcctcctgcaaggtccagcagaaggacctgacggacgaggccatc
gctcgagccgtctgctccaaggtgggagactgtcctggggtgtcctactctgacatcgca
gccaaggcgtacgagtgtggccgtcctgagctggccatcaagctcttggactatgaggcc
cgttctggagaacaggttcctctgctgctgaagatgaagaggagccagctggccctcagc
aaggcggtggagagcggcgacaccgacctggtgtacaccgtggtgacctacctgaagaac
gagatgaaccgaggagatttcttcatgaccctgaggaaccagccggtggccctcagcctc
tacagacaggtgggctcagcagaaccagaaggtgtaggaggtcctggctggtatccaaac
aggaagatggaccagatcccagctcatccatggttcctccccttcaggttctggtggctg
aagctaaagtctctggctgagaaggagcagtgggaggagctggagaagttctccaggagc
aagaagtctcctattggttacctggccttcgtggaggtgtgcatgaagaacaacaacaga
catgaggccaagaagtacgtcagtaaggtcacacctgagcagaaggtcaaagctcacctg
gctgtcggggacctggagggggccgcagacgcagccatcgagcgccgcaacgactcggag
atgggggcggtcctgtccagatgctccgcctccgaccgcctgctgatggacaggttgacc
cgcgcccgggccggcgctgccaggaagtga
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integrated database retrieval system
