Cyprinodon variegatus (sheepshead minnow): 107102323
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Entry
107102323 CDS
T06110
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107102323
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107102323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
107102323
NCBI-ProteinID:
XP_015257063
Ensembl:
ENSCVAG00000015136
UniProt:
A0A3Q2D367
LinkDB
All DBs
Position
Unknown
AA seq
2723 aa
AA seq
DB search
MGPLKTNRRRSPPLTRGRGGKKGVGSQPLKEKDSKKVKKETLVRTAEHTPSTPAKRRYTP
TSTDANPDDEPIANSNTIAKEETTERVKHGVSEASDEKKAEEKSEKEKMVGTNGNSIPPT
GSVVLPTSAPSPLPIAAPQQATNHGPGLGSVSSRKTATFKARVPKKKYMYEHFANNTSVT
NNVPTSSPALISNSYGNFNSKNSQSISTPNNMFKCSNNITNSINKGTNVSINSSTSSNTT
SSITSTNSSRNIGAGSHYTYMNSIDSRRNNCSGNQPSVLAGERKATEANHFVSVKDKTPR
ISHSKERDSLTGENELEGAPNSVRSSSTDTASEHSSDLDVMEATGPNTKLHIVASVQNSH
LKEISLSEGLAEALAKGMKNQRVLARQIKNKPPCDIKTASNEDSCLHSPVFRQGVVRRVS
GGSVEVQLQGVETLVKYPFCGGTMVTPSIEAESAVDFILDAPPPGTSPVAVGTRVCVPFV
EEEERIPPVYREGVVAQVDPHPGVSFPYQVLLNEEREALGGELVGEKKEGKVTGRFVWVS
RQSLRLLIPPWEVSQLDGGRAKERELEREREERERLEEMEVEREVCQLSIGMGVLGAGAR
LGPGFSHEGTEGVHTSRTVHPPASSSTLSSSVVAITSHGCESNMSGRERQKQPNTPEEDR
EVSRFNMGHSIGPKASAGTSQYRNIVSKPTSYAPTSTHLSMVRGVGPLHLSTITSPLPTP
SPSLLTPEISTTTSNLPLTKTTPTQTPTPTSGVGSSPASSRSRTPLSLAQQKYKKGDVVC
TPNGIRKKFNGKQWRRLCSKESCMKESQRRGYCSRHLSMKTKEMEAAGGEKGGGGSSSGT
VTPSDLRGRASSEFEWDDTSRESSETSSRGDSRPRLVLPSLLPHELSSRFDVDECEAATM
LVSLGSSRSGTPSFSPISNQSPFSPAPSPSPSPLFGFRPANFSPITASPVLQHRRHRQPS
GAGGGGGSKSTTLAGAGERERHISGIQPSFPSNLTFTVPMSPSKRKSDAPPPPPLPSHHH
DYTPKTELDLGDLNNSFRVLSPQTPASHSRTHTPTLSQLKGHSTPSSSRPPSSAATSPPP
LLVSATPPSPLSTDGGPRRVVPIPQQTLRDSPVIVRNPEVPFAKFTESPSERGGGRNEAA
IDNNPPKEIALTPLTAQPVAGLQVPVPINAATATVPNGTVYLRSPAQTLVLVSPTASSLS
STDPTANPLQALSITVSTTVAASAPSSTDSSGEREDNKCTVFGGEVQQPVPCHPSPTALL
PLILPAETLHPAPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDAPSHPGEG
QHPVNHPQATSLKTGHCFPSDCQGVAALSQEPAEAPPTVERGPPSRPPPSSEEPLPEKEK
GDAERERPDSETESDVDDPFLPGVVPEQPLSTSPVKRRTQSLSALPKDGDKSSPGKREKD
HIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKE
AHFKAHPDWKWCNKDRKKSSSEGRGVPGNKDIRERSMSESTEPHSVELKGVGPGLAGVSE
RSTGEGHVGQLTRPRAFSQSAMHSLERGDRGNTQALAELAQMCGDSGSQYPSHAPAPSHT
QRGVSEDMTSDEERMVICEEEGDDDVIEDPYPSTSIDLKCKERVTDSDSENGSGDEGDRK
RVFAPVICSTASSSSSHHTPHGRSVSLSSFPSSRRYDEGRSGVGGFSDHRRKERSDGESK
DTFVSEGSNMQASSVSISSGQSIKSTSPAGGLPSSSVGSIGGSQALGVGAVRVASTVVTN
VMRPVISTPLPIASKPRDGGPSSSPHPPERKSLTPQQQPQILLSPGAGGGPPATGGGYYP
PSSPSPVGAGSVVTNLVLGGALPAQSALQLINPPPHPQPSHQQALASTAVSASPSQSNGP
LSLLQPQFLPGSSLAATGGKGITQVQYILPTLPANTNPKSPPQNHSQPTSIFNLPTAPPT
HVSLANGKQQSAGSQTGYSSSPAVGVVSPGARVQTQPQVLPGKMLVPMATVRTAQAPAQQ
FPIVAPSLPVQNGAQAGSKIYHLASMPVVQSQLPQGGAVHPASPFPVTLGAAAVVTPGSA
PSQAVLLPPAPTRITYVQPTSGVPSTLPLVSTTTGSSPSQQTLPVPGSAYVPSPLATLGF
TAIAPPGQTLVQPLIAGQPPLLATAQSPQPSTSAPASVSGGQIVTAIYPPSQNVSMASGV
VSMAQMPPSVVYSVSGPSSSSPHILPKHAAPPSAVLHSQPHLERQVDRHLPPDRSADRQS
DSQVDILAHSERQTTASNSNSSAAPPSGSAVSTRSCSPPLQIQAPGSTPKLPQLPVRLPQ
KVKATVATIPVGSYDGGGRGKDREREKEREKEREKQAAANSHFSFEAEPSGHTGSPSTHP
TEEPSSSDRPLEGSSTADSSDTRNRESTTPKEGGWKETLPSSPLPPPSATEPALPPPQTD
KDGPTPKRIKARPPPLKKTFDSVDKTGRVLSEVYFEERFAELPEFRPEEVLPSPTLQSLA
TSPRAILGSYRRKRKNSTDLDSATDEQASPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTF
DRAATDGEDILAELEFEKVPYSSLRRTLDQRRALVMQLFQEQGFFPSAQATAAFQTRYSD
IFPSKVCLQLKIREVRQKIMQTAAPSDASALGPTDSASSAPGPSGSQSAEGSGKGGGDLH
DEEVEQGNAASPEELRESQDSSR
NT seq
8172 nt
NT seq
+upstream
nt +downstream
nt
atgggaccactgaagacaaatagaagacgttctccgccattaacaagaggcagaggggga
aaaaagggagttggttctcagcccttaaaagaaaaggactccaaaaaagtgaagaaagag
acacttgtcagaaccgcagagcacacacccagcactcctgctaaacgcagatacacaccg
acatccacagatgccaacccagatgatgaaccaatcgcaaacagtaataccattgctaag
gaggagactactgaacgtgtgaagcatggcgtgtcggaagcaagtgatgaaaagaaggca
gaggaaaagagtgaaaaggaaaaaatggttgggacaaatggaaacagtatcccacccact
ggttctgtagtattgcctacctctgccccatcaccactccccatagctgcaccccagcaa
gccaccaatcacggccctggcttaggctcagtttccagtaggaagacggccacatttaaa
gctcgtgtacccaagaaaaaatacatgtatgagcactttgccaacaatacaagtgtcaca
aataatgttcctacctccagtcctgctctcatatctaatagctacggcaatttcaacagc
aaaaacagtcagagtatcagtactcctaataatatgtttaagtgcagcaacaatattact
aacagcattaataaaggcactaatgtgagcataaatagcagtacttccagtaacactaca
agtagtattaccagtacaaatagcagtagaaacattggtgctggcagccattacacttat
atgaatagcattgatagcagacgtaataattgctcaggtaatcagccatcagtgttagca
ggagaaagaaaagctacagaagcaaaccattttgtctcagtaaaggataaaacccccagg
atctcacattccaaggaaagagactcactaacaggagaaaatgaattggagggggcccct
aactcagtgcgctcttcctctaccgatacagcaagcgagcattcctctgacctggatgtg
atggaggcaacaggaccaaatactaaactccacatcgttgcttctgtccaaaactcacat
ctgaaagagatcagtctttcagagggactggctgaagctctggcgaaaggcatgaaaaat
cagagagtactggcccgccaaataaaaaataaaccgccatgtgatataaagactgccagc
aatgaagattcctgcctccattctcctgtgtttagacaaggagtggtgcgtagggtaagt
ggaggttctgttgaagttcagctccaaggagtagaaacccttgttaaatacccattttgt
ggtggcaccatggtgacaccctctattgaggccgagagtgcagtcgacttcattttagat
gcacccccacccggcacttcccccgtggctgttgggacacgggtgtgtgtcccatttgtc
gaagaagaagaaaggattcctccagtgtacagagaaggggttgttgctcaagtcgacccc
caccctggtgtctcatttccttatcaggttctacttaacgaagagagagaagctctaggt
ggagagttagtgggggagaagaaggaaggcaaagtaacgggtcggtttgtctgggtgtcc
cgacagagcctaagactactcatccctccctgggaggtttcccagttagacggtgggaga
gcaaaggagagagagcttgagcgggaacgggaggagagggagcgcctggaggagatggag
gtagagagagaagtgtgccagttaagcattggaatgggggtgctgggagctggtgcacgg
ttgggccctgggttttcacatgaagggactgaaggggtgcatacttccagaaccgtacat
ccacctgccagttcctccactttaagctccagtgtagttgccatcacaagtcatggatgt
gaaagcaatatgtcaggaagagaaaggcagaaacagcccaacacgccagaggaagatcgt
gaggtatctcgttttaacatgggtcattccattggtccaaaagcaagtgctggaacctct
cagtacaggaacattgtttccaagcccactagttacgctcccacatccactcacctctca
atggtgaggggtgtaggaccacttcatctctctacaataaccagtcctctgccaacccca
tctccttccttacttacccctgaaataagcaccaccacttcaaacctacctctaaccaag
accactcccacccagactcctactcccacttctggtgtgggctcctccccagcctcctcc
cgttccaggactcccctctcactggctcagcagaagtacaaaaaaggcgacgtggtatgc
actcccaacggtatccgtaaaaagtttaacgggaagcagtggaggaggctgtgctccaaa
gagagctgcatgaaggagtctcagcgaagagggtactgctccagacacttgtccatgaaa
accaaagagatggaggcagcagggggagagaagggagggggaggcagcagctcagggacg
gtgaccccttctgaccttcgggggagggcaagcagtgagtttgagtgggacgacacgtca
agagagagcagtgagacaagcagcagaggagactccagaccacgcttggttctcccttcc
ctcctccctcatgagctttcatcaaggtttgatgtagatgaatgtgaggctgccaccatg
cttgtgtccttaggaagctctcgctctggcactccttccttctcccctatctccaatcag
tctcccttctcccctgccccctctccctcaccctcaccgctgttcggtttcaggcctgct
aacttctcccctattactgcatccccagtcttacaacaccggagacaccgacagcccagt
ggtgcaggagggggaggggggagtaaatcaacaaccctagcaggagcaggtgaaagggag
agacacatttcgggcatccagccgtccttccccagtaacctgacgtttacagtccccatg
agccccagcaagagaaaatctgatgccccccctcctccaccccttccctcacaccaccac
gactatacgcccaaaacagagctggatctgggagacctcaacaactctttcagagttctt
tcgccccaaacaccagcatcacattcccgcacacatacgcccaccctctcccagctcaaa
ggacatagcacaccctcttccagcaggcccccatcctctgctgctacctctcctcctcct
ctgctggtctccgcaactcctccttctcctctctcaactgacggagggcctcgacgagtg
gtccctataccccaacagactttacgggactcccctgtcattgttcgaaatcctgaagtt
ccatttgcaaaattcacagagtctccatcagaaagaggaggaggcagaaatgaggcagct
atagataataacccccctaaagaaattgcgctaacccccctcactgctcagcccgtcgca
ggcctccaggttcccgtccctattaacgctgccacagcaacagtgcccaacggtactgtc
tacttgcggagcccagcccaaactctggttctcgtttccccgacagcttcctccctatct
tccactgacccgacagccaaccccttgcaagccctctcaattaccgtcagcacaaccgtg
gcagcttctgctccaagtagcacagacagctctggagagcgagaggacaacaagtgcacc
gtgtttggtggggaggtgcagcaaccagttccctgtcacccctctcccacagctctgctc
cctctaatcctaccagcagaaactttgcaccctgcccctcgaaaggacatcatcatggga
cgtcctgggacagtgtggaccaatgtagaaccacggtcagttccagtcttcccctggcat
tcattggttccttttctggcacccacccagtcagatgctccatctcatccaggtgagggc
cagcatcccgtcaaccaccctcaagcaaccagtctgaagacagggcattgttttccctca
gattgtcagggggtggcagcgctctcacaagagcctgcagaggcacctcccactgtagag
agaggtcccccatccaggcccccaccctcctctgaagagcctcttcctgagaaggagaaa
ggggatgcggagagggaaaggcccgacagtgaaaccgagagcgacgtagacgaccccttc
ctcccaggagttgtaccagagcagcctctctccacatccccagtaaagcgacgcactcag
tctctcagtgcactgcccaaagatggagacaagagcagtccaggaaagagggagaaggac
cacatccggcgaccaatgaatgcatttatgatttttagtaagcgtcatcgagcattagtg
catcaacgccatccaaaccaggacaacaggacagtaagcaagattcttggggagtggtgg
tatgccctgggacctaaggagaagcagaagtaccatgacttggccttccaggtaaaagag
gctcactttaaagcacacccagactggaaatggtgcaacaaagacaggaaaaagtccagc
tccgaaggtcgtggtgtccctggaaacaaagacatcagggaaagaagcatgtcagaatca
acagagccccattctgtggagctgaagggtgtgggtccaggtctggcgggtgtatcggaa
aggagcacaggagagggacatgtgggtcagcttacccgcccccgagccttttcccagagt
gccatgcacagcctggagcgaggggacagggggaacacccaagctctagcagaactcgcc
cagatgtgtggagacagcggcagccagtatcccagccacgcccctgcaccctctcacact
cagaggggggtcagtgaggacatgaccagtgatgaagagcgcatggtcatctgcgaggag
gaaggagatgatgatgtcattgaggacccttatcccagcacctctatagacctaaagtgt
aaggagcgcgtgactgacagcgacagcgagaacggttcaggagatgaaggagatcggaag
agagtgtttgctccagtcatctgttccactgcatcatcgtcttcctcacaccatacccct
catggcaggagtgtttctctgtcctctttccccagcagcaggcgttatgatgaggggaga
tctggagtaggagggttttcagaccacagaagaaaggagagaagtgatggagagagtaaa
gacacttttgttagcgagggaagcaatatgcaggcgtcttctgtctcaatctcttccggt
caatcaatcaaatccacttctccagctggagggcttccgtcctcttcagtgggctctata
ggagggagccaggctcttggtgttggagctgtgagggtcgcgtctacagtagtgacgaat
gtgatgcgtcctgttatcagcacacccctaccaatcgccagcaaacccagagatggcggc
ccttcatcaagcccccatcctccagagagaaagtccctgactcctcagcagcagccccaa
atccttctcagtccaggagcaggaggtgggcctccagccacagggggcgggtactaccct
ccatcctcaccaagtcctgtaggtgcaggcagtgtagtgactaatttagtcttaggaggg
gctctgccagctcagtctgctttacagctcatcaaccctcccccccaccctcagccatcc
caccagcaggctttagcctccacggctgtttcagcctctcccagccaaagcaacggtccc
ctgtccctccttcagccccagttcctgcctggttcatctctggccgccaccgggggcaag
ggcatcacacaagttcagtacatcctgcccaccctgcctgccaacaccaaccccaagagc
ccacctcagaatcacagccagccaaccagtatcttcaacctgcccacagctccacctaca
catgtatccttagccaatggaaagcagcagagtgccggttcacagacaggatattcgtcc
agccctgcggtgggggtagtcagccctggagcaagagtgcaaacccagcctcaagtgctc
ccaggtaaaatgctcgttcccatggcaacagttcggactgctcaagcccctgcccagcag
tttcccattgttgccccatcccttcctgtccagaatggtgcacaggctggaagcaagatc
taccaccttgcctccatgccagtggtccagtcccagctgcctcagggtggagcggtgcat
cctgccagccccttccctgtaacactgggagcagcagctgtggtgacgccaggatcagcc
ccatcccaggctgtgctgctgccacctgcacccacgaggattacctatgtccagcccacc
tcaggggtcccatccactttgcctctagtctctacaacaaccggctcctctcccagtcag
cagactctaccagtgcctggatctgcatatgttccctcgcctttagcaacactcgggttt
acagccatcgcaccacctggacagacactggttcagccactgatcgcaggtcagccgccg
ctcctcgccacagctcagtcccctcaaccctccacctctgcccctgcctccgtctccggg
ggccagatagtcaccgccatttaccctccatcacaaaacgtcagcatggcatcaggggtg
gtctcaatggcacagatgccccccagcgtggtctactcagtctcgggcccttcaagctcc
tcgccccacatattacccaaacacgctgctcccccctctgcagtcctccactcgcagccc
cacctggagcgacaggtggacaggcatctgcctccggacagatccgccgatcgccagagc
gacagccaggtggacatcctggcacattcagagaggcagaccaccgcatccaacagtaac
agctcagcagcacctcctagtggctcagctgtgtctacaaggtcctgcagtcctccgctt
cagatccaagcacctggcagcacacctaagctaccacagcttccagtcaggctccctcag
aaagtgaaagcaaccgtggcgacaattcctgtaggcagctacgacggaggagggcgagga
aaagacagggagcgagagaaggagcgggaaaaggaaagagagaaacaagcggcggccaac
agtcatttctccttcgaagccgaaccttcagggcacacggggtctccatcgactcatccc
actgaggagccgtcgtcctctgacagacccctggagggttccagcaccgcagactcctct
gacacaaggaacagggaaagtacaacgcccaaagagggtgggtggaaggagactctccct
tcctctcctctcccccctccatcagccacagagcccgctttgcctcccccacaaaccgac
aaagacggccccactcccaaaaggatcaaagcccgcccaccaccactaaagaagaccttc
gactccgtcgacaagactggcagggttctgtccgaggtatatttcgaggaacggtttgca
gagctgcctgagtttcgaccagaagaggttctgccttcacccaccctgcagagcctggcc
acttcacctcgcgccatcctgggcagctatcgccgcaagaggaagaactccacagatttg
gactctgcgacagacgaacaagcctctccgaagaggaagagtagacgacgttccagctgc
agctctgagcccaacacgcctaaaagtgccgccaagtgtgaaggagatatcttcaccttc
gacagagcagctacagatggagaagacattctggcagaactggagtttgagaaggtgccg
tactcgtccctgagacgaactcttgaccagaggagggcgctggtcatgcagctgttccag
gagcagggcttctttccatcagctcaggccaccgcggcattccagacaagatactccgac
atatttccttccaaggtgtgtctgcagttgaagatcagggaggttcgacagaagatcatg
cagacagcggcgccgtcagacgcctccgctttaggccctacagactcggcttcgtcggct
ccagggccttcgggctcccagtcagcagagggatctgggaagggaggtggagacctgcat
gatgaagaagtggaacagggaaacgctgcgagtccagaggagcttcgtgagtcacaggac
tcctctagatga
DBGET
integrated database retrieval system
