Cyprinodon variegatus (sheepshead minnow): 107102399
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Entry
107102399 CDS
T06110
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107102399
Transporters [BR:
cvg02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
107102399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSF
DUF6338
Motif
Other DBs
NCBI-GeneID:
107102399
NCBI-ProteinID:
XP_015257173
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MAVDVPGLVSVIIFYILILAIGVWGSRKARHVEKKCTGPKSEIAIVGGRNISVLVGMFTM
TATWVGGAYIMGTAEVVYSPSQGLVWAVGPPSFAMNFLLGGLFFAKPMRSMCYVTMLDPF
QIRYGSIFTAVIMLPALVSDILWVACILAALGGTMSIILGISSTISIIISAAVSIIYTFL
GGLYSVAYTDIFQLCFIFVSLWISVPFTVLSPAVTSISQTLPLNHTNKHEWIGHLEMADA
GKWVDEMLLLALGGLSYQALYQRILSASSSAQAQITCFAAAVTVFIMGIPSVVIGVMAGA
ADWNQTDYGLPPPFERGDAGKILPLALQHLTPTWVAVLGIGSVAAAVMSSMDSVLLSSAS
MFTQNIYKKILRKKASERELQWVIRICVLVVGLAGMGLAFGDDSVAALWILSGDLLYCVI
FPQLVCVLHFQRANTYGAISGFVVGLLLRVLSGEPILRIPPVLLYPGWREENDRIIQYFP
YRTVAMLSSLISIVAVSWLLDLIYNRQLVPESWDFLQVFKEKNETEEQDRENDPCEEMNQ
VFNTKF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggatgtccctggactggtgtctgtgatcattttttatattcttatcctggca
attggagtatggggatcgcgtaaagccaggcatgttgagaagaaatgcacaggcccaaag
agcgagattgccattgttggtggccgcaacatcagcgttctggttgggatgtttaccatg
acagcaacatgggttggtggagcttatattatgggaactgctgaggttgtttattctccc
agccaaggccttgtctgggctgtgggccccccttcatttgcaatgaattttttgttgggt
ggactattttttgcaaaaccaatgaggtcaatgtgttatgtgaccatgttggacccgttt
cagattcgttatggcagcatatttacggcagtaatcatgcttcctgctttggtcagtgac
atattatgggttgcctgcatccttgctgctcttggtggaactatgagcataattcttggg
atatcatctaccatctctatcatcatctcagcagctgtctccatcatctacacatttctt
ggaggcctttactcagttgcatacactgatattttccagctttgttttatttttgttagc
ctgtggatctctgtcccgtttaccgtgcttagtccagcagttacttctatttcacaaaca
cttccactcaaccatacaaataaacatgaatggattggacacctagaaatggcggacgca
ggaaagtgggtcgatgagatgctgctgctggctttagggggactgtcctatcaagcttta
taccaaaggatcctctccgcatcctcctctgctcaggcacagatcacctgtttcgctgct
gctgtgacagtttttatcatgggaatcccctcagttgtcattggagtcatggctggtgct
gcagactggaaccagactgattacggtctccctcctccgtttgaacgaggagatgcaggg
aagatcctgcctctggctctgcagcacctcacacccacctgggtggcagtgttaggcatt
ggttctgtggctgcagctgttatgtcctccatggactctgtgctgctttcatcagcatct
atgtttacacaaaacatatacaagaaaattttgaggaaaaaggcctcagagagggaactg
cagtgggtgatccgcatttgtgtgctggttgtaggtctggctggaatgggtttggccttt
ggggatgacagtgtagcagctctctggatcctaagcggagatctcctctactgtgtgatt
ttcccacagctggtctgtgttctgcacttccaacgtgcaaacacctatggagctattagt
ggcttcgtggtgggcttgttgctccgggtactgagtggtgaacccatactaaggatccct
cctgtgctcctgtaccctggatggagggaggagaatgatcggatcatacagtactttcct
tacagaactgtcgccatgttatcatctttaataagtattgtagcagtgtcatggctgctg
gacctgatctacaatcgtcaacttgttccagagtcgtgggactttttgcaggtttttaaa
gagaagaatgagaccgaggagcaggacagagaaaatgatccttgtgaagaaatgaaccaa
gttttcaacacaaaattctga
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