Cyprinodon variegatus (sheepshead minnow): 107102404
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Entry
107102404 CDS
T06110
Name
(RefSeq) phosphofurin acidic cluster sorting protein 2-like isoform X1
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107102404
Membrane trafficking [BR:
cvg04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
107102404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
107102404
NCBI-ProteinID:
XP_015257193
Ensembl:
ENSCVAG00000011155
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MMAAAVERGGVRAAFLNPGSGSGGPALTMPPTGALAGAVVLGSGSSSMPVPMNLFATWEI
DRSSPSCVPRLCSLTLKKLVVLKELDKELNSLSIAVKIQGSKRLLRSNEYVLPPSGLMET
DLELTFSLQYPHFLKRDANRLQIMLQRRKRYKNRTILGYKTLAVGVINMAEVMQHPTDGG
QILGLHSNVKEAPVRVAEISVYSLSSQPIDHEDGSGQACRKTKTSDRSPDMDNYSEDDDD
SYSSEQEASDDAVNAQDIYDEDDEVRKPKKPRRKMIRTTSMTRQPNFKQKFVALLKRFKV
TDEVLDSDPVDQTQEVEEDLDLLYDSLEVYNQSDSGPEMEDNESVLSTPKPKLKPFFEGM
SHSSSQTEIGSLHSQKSQQRELSCPSGEFLTVDRCKVQGSRYQDDSITETAVGVQEPETE
NSGSGAGDANSWDVSTERIPSTVGKLCKTESQNHMSPSKVENKLQRRPRSTSMKDRQNSK
AQSDRTSSMESECSPDSRLIAQFQSLCSSFFSKVPRKSVYDQLNQILISDERLPESIILI
NTTEWQGQYVADLLHEQGQPIVSTCSAADVQAAFNTIVTRIQRFCNCNAQTPPTIKVAVA
GDQSYLSTILRFFVEQLANKTPDWLSYIRFLVIPIGSHPLAKYVASFDSRFNNIFMDTAW
RELFCRTERPTSDNIDVAGRIIQYLAGANVSHQFPISEAMLTYKQKRKRSLYFDFYISPD
EDSCQKFVPFIGVVKVGIVEQSLSTSMDSDDAMGGNTSILASPPPPSAGTYGKEIGSTPP
QSPSVSTALSGAGSPCSGSEVMGLQVDYWTWQGSEKKKEGEKRDVGLKNTLKCNFRSLQV
SRLPCGGELTPPPSMAMTVVTKEKNKKVIFLSKKPKEKELDSKSQVIDGISRLICTAKHQ
HTMLRVNIDGVEWNDVKFFQLAAQWPTHVKHFPVGIFGYTKPV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggctgtggaacgaggaggcgttcgggctgctttcctgaaccctggcagc
ggcagcggcggacccgcgctgacaatgcccccgaccggagcgctagccggggctgtggtc
ctgggctcaggatccagcagtatgcccgtccccatgaacctctttgcaacctgggaaata
gaccgatcctctccgagctgcgttccgaggctgtgcagcctcaccttgaagaagctggtt
gtcctcaaagaactggataaagaactgaactcactttctatagctgtcaaaatacagggt
tcaaagcgacttctgagatcaaacgagtacgtcctccctcccagcggactcatggagaca
gaccttgagctcaccttctcactacagtacccccacttcctaaagagggacgccaacagg
ctgcaaatcatgctgcagagacgaaagcgctacaagaatcgaaccatactgggctacaaa
acattggccgtgggagtcatcaatatggccgaggtgatgcaacacccaacagacggggga
cagatcctcggtctccatagcaacgtgaaggaggccccggtgcgcgtggcagagatcagc
gtttactctctgtccagccagcccatcgaccacgaggacggcagcggacaggcttgccga
aagaccaaaacctcagaccgctcccctgatatggacaattattcagaggacgatgacgac
agctattcgtctgagcaggaggccagtgatgacgcagttaatgcccaggatatttatgat
gaagatgacgaagtgcggaagcctaagaaaccccgtaggaaaatgatccgaaccacctcc
atgaccaggcaacctaattttaagcagaaatttgttgctctgctgaagaggttcaaggtt
actgacgaggtgctcgactctgacccggtggaccagacccaggaggttgaagaggatctg
gacttgctctacgacagcctggaggtgtacaaccagagtgacagtgggccagagatggag
gacaatgagagtgtactgagcacgccaaaacccaagctcaagcctttcttcgaaggaatg
tctcactccagctctcagacagagatcggaagcctgcacagccaaaaaagtcagcagaga
gagctgtcctgtcccagtggcgagtttctgactgtggatagatgtaaagtgcaagggagc
cgatatcaggatgacagcatcactgaaactgctgtcggggtccaggagccagagacagaa
aacagtggatcaggagcgggagatgcgaacagctgggatgtcagcactgaacgcatcccc
agcaccgttggcaagctctgtaaaacagagtcacaaaaccacatgtcaccaagtaaagtg
gagaacaagctgcagaggcgacctcgcagtacctccatgaaagacagacaaaactcaaag
gctcagagtgacagaaccagcagcatggagagcgagtgttccccagactcccgactgata
gcacagtttcagagtctctgctcctcgtttttctccaaggttcccaggaaatctgtgtat
gaccaactaaaccagatcctcatctcagacgaacgcctaccagagagcatcattctcatc
aacactacagagtggcaaggacagtatgtagccgacttgctccatgaacagggccagccc
attgtctccacttgctctgctgctgatgttcaggctgccttcaacaccatcgttacacgc
attcagagattctgtaactgtaatgcacagacgcctccaacgataaaagtggccgttgca
ggtgaccagagttacctcagcaccatcctgaggttcttcgtggagcagcttgccaataag
acccccgactggctcagctatatacgcttcctcgttatccccatcggttctcatcccctg
gcaaagtatgtggcctcctttgatagccgcttcaacaacatcttcatggacacagcttgg
agggagctgttctgcaggacggaacggcccacatcagataacatagatgtagcaggacgg
atcatacagtatctggccggggccaacgtgtcccaccagttccccatctcagaagccatg
ctcacctacaaacagaagaggaaacgaagtctgtattttgatttttatatcagcccagat
gaagattcctgtcagaagttcgtgccatttattggggttgtgaaagttggaatagtggag
caaagtctttccacctcaatggactctgatgatgcaatgggaggcaacacgagcatcctg
gcctcccctccacccccatcggctggaacgtatgggaaggagattggaagcacccccccg
cagtctccctctgtgtccaccgccctgtcaggagctggctctccgtgttcgggcagcgag
gtgatggggctccaggtggattactggacgtggcaaggctcagagaagaagaaagagggc
gagaagagggacgtggggttgaagaacaccctgaagtgtaacttccggtcgctccaagtc
agccggctgccctgcggaggggaactcactcccccgcccagtatggccatgaccgtggtc
accaaggagaagaacaagaaagtgatttttctcagcaagaagcccaaggagaaagagctg
gactctaagagccaagtgattgacggtatcagcaggttgatctgcacagcgaaacaccaa
cacaccatgctgagagtcaacatcgatggggtggagtggaacgacgtgaagtttttccag
ctcgccgcccagtggccgacgcatgtcaagcacttcccggtgggaatctttggttacaca
aagccggtgtga
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