Cyprinodon variegatus (sheepshead minnow): 107102442
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Entry
107102442 CDS
T06110
Symbol
nlrx1
Name
(RefSeq) NLR family member X1
KO
K12653
NLR family member X1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04137
Mitophagy - animal
cvg04621
NOD-like receptor signaling pathway
cvg04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107102442 (nlrx1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107102442 (nlrx1)
04622 RIG-I-like receptor signaling pathway
107102442 (nlrx1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvg04054
]
107102442 (nlrx1)
Pattern recognition receptors [BR:
cvg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107102442 (nlrx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
NLRC4_HD2
LRR_CARMIL
NLRX1_C
WHD_NOD2
DUF815
Motif
Other DBs
NCBI-GeneID:
107102442
NCBI-ProteinID:
XP_015257248
Ensembl:
ENSCVAG00000010547
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MSLLFRQRIQLPRTWSWQRRVEVSCCHCKTFSSISSNQDPIEIHKSKLFLWFSHLPKEEK
QFGGLFSPETMYVDPLMIERKEEETAGLLRLPYQTQISSSHPLTIEELFEPTGTWNEGLG
LNVLLYGAVGTGKASMFRKLVLDWCKGTTLTRFKLLLPFSCDDLNQMSKAVSLNGLVDRK
YLHLKNHPFLSGDGEQAKDVLFLFNGMEKMQVDFKIGSSELCNNPNEPLPPSVIIVNLLR
KYLLPEASIMMVTRLSAVERIPQKYVTRYVQICGFNDPDRQRKYFTSRLLQSEEAAHNKE
AQTLIELLYHNLQSESQLAAACSLPSYCWLTCATLHLLHFTSAQAPIRTLTGIYTSFFRL
NFGGEVLGARTGNSISSPEYHSSLMMYVVRTLGKLAFDGVMNKRTSFSGKELEQWIGGKT
KTDEELHQLAVFQTDVLDFFLAPCVKSDNHLPAKLSENDDKQYVFAAPVMQEYLAALYVV
LGENKSALEKLTSQMSVAIGQAGEDVGAVVNILSKFIPLRLFAIFNLLKLFPKLYEKISS
HNKGKIARTMAAEMFRTEDSNNEDVLDQVEQSLLGVHGPQPKQWDDRQPFELYPIFMGGL
LQYSNRVLLKQLDCNIKSTTVAQITRALRKYLVRELSKPQPPEEVMDLLVLLYEFQNPRL
TEQVLSSIRSIRLTNIRMTSLKCLILSSVLSCTPRSYHLEELDLSSCLLTHNMLQMLGPA
FRHARSLNLQFNNLGPDSCILLRDLLLEPKTCISSLQLCDNPLEDSGVCILLEALPQNQS
LTYLSLMHTGMGDSAALALAERLQLHTGLQELNVAYNVIGDKAAEVLVDACRDHPSIHTV
HLYLNAITDEGKQALYGRGGPKGKGNERRVRVLASVTEGSDISDQWHPILKVIRENASSW
DRNRVKQQLKISNCEDPKLPLLLDHSQHRLASGLHVKPPPIYSADI
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgagccttctgttcagacagagaattcaactgcccagaacttggagctggcagaggaga
gtagaagtgtcctgctgtcattgcaagaccttcagctccatctcttctaatcaagacccc
atagagatccacaagagcaaactcttcctctggttcagccaccttcctaaagaggagaaa
cagttcggaggtctctttagcccagagaccatgtatgtagatccactgatgatagagaga
aaggaggaggagacggcaggacttctccgattaccttaccaaactcagatctcctctagc
catcctctcactatagaagagctgtttgagcccactggtacctggaacgaagggctcgga
ctcaatgtgttgctgtatggtgctgtggggacagggaaggcttcgatgtttcgtaaactg
gtgctggactggtgtaaaggaaccacattgactcgcttcaagctgctgcttcctttctca
tgtgacgatctcaaccagatgtcgaaggctgtttctttaaatggtttggttgacaggaag
taccttcatttgaaaaaccatccatttctcagtggagatggagagcaagccaaggatgtg
cttttccttttcaatgggatggagaagatgcaggtggactttaagattggttcctccgag
ctttgcaataaccccaatgagcctcttccaccaagtgtaatcattgtgaacctgctaagg
aaatacctacttcctgaggccagtattatgatggtcaccagactgtctgcggtggaacgc
atccctcagaagtatgtgactcgttacgtccagatttgtgggttcaatgacccagatcgc
cagcgtaaatacttcaccagccgcctcctgcagagtgaagaggcagctcacaacaaagag
gcccagacactgatcgagctcctttatcacaacctacagagtgaaagccagttggctgct
gcctgctccctaccttcctactgctggctcacgtgtgctacgttacaccttctccatttc
accagtgcccaggcaccaattcgaacactgactggtatatacactagttttttccggctg
aacttcgggggtgaggtgctgggcgcaagaactgggaatagcatatcttctccggagtat
cacagttctttaatgatgtatgttgtccgtacacttggcaaactggcctttgatggcgtg
atgaataaacgcacctctttctcaggcaaagaactggaacagtggattggtggcaagacc
aagacggacgaggagctccatcagctggccgtgtttcagacagatgtgctggatttcttc
ctagctccgtgtgtgaagagcgataatcatctacctgcaaaactgtctgaaaatgatgac
aagcagtatgtgtttgctgctccagtcatgcaggagtacctcgctgcgctctacgtagtt
ttaggagaaaacaaatctgctttggaaaagctgaccagtcagatgtctgtagccattggt
caagcaggcgaggatgttggtgcagtggtgaacatcctttctaagttcattccactccgg
ctcttcgctatattcaacctcctcaagctttttccaaaactctatgagaaaataagcagc
cacaacaaagggaaaatagccaggacgatggcagctgagatgttccgcactgaggacagc
aataacgaggatgtgctagatcaggtggagcaaagccttctgggagtccatggcccacag
cctaaacagtgggatgacaggcaaccttttgagctgtaccccatcttcatgggaggattg
ttacagtacagtaaccgggtccttctaaagcagctggactgcaacatcaagagcaccacg
gttgctcagataacacgcgccctcaggaagtaccttgtccgagagctaagcaagccccaa
cccccggaggaggttatggatctgctcgtcctcctgtacgagttccagaaccccaggctg
actgaacaggtcctatcctcaatcaggagcattcgtttaaccaacattcgaatgacttca
cttaagtgcttgattttaagctctgtgctatcatgcactcctagaagttatcacctggaa
gagctggacctgtcctcctgtctcctgacccacaacatgctgcagatgctgggacctgcg
ttcagacatgcacgcagcctcaatctgcagtttaacaacctgggtccagattcatgcatc
cttctgagagacctgctgctagagccaaagacctgtataagttctctacagctctgtgat
aacccgctggaggactctggggtctgcatcctgctggaggcgctgccacagaaccagtcc
ctcacctacctgtccctgatgcacaccgggatgggggacagcgcggccctggctctggct
gaacggctccagctgcacactgggctccaggagctcaacgttgcctataatgtgatcggc
gacaaggcagccgaggttctggttgatgcctgcagggaccatcccagcattcacaccgta
cacctgtacctgaacgccatcactgatgaggggaagcaggccctgtatggccggggtggg
ccaaagggcaaagggaacgagcggcgggtcagagtcctggcctccgtcactgaaggctcc
gacatctcagaccaatggcaccctatcctgaaagtgatacgagagaatgcatcttcctgg
gaccgcaaccgagtcaagcagcagcttaagatctcaaactgtgaggatccaaagctgcct
ctcctccttgatcactctcagcaccgcctcgcctcagggctgcatgttaagccccctcct
atttactctgctgacatctga
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integrated database retrieval system
