Cyprinodon variegatus (sheepshead minnow): 107102461
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Entry
107102461 CDS
T06110
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg02010
ABC transporters
cvg04145
Phagosome
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107102461
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107102461
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107102461
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107102461
Enzymes [BR:
cvg01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
107102461
Transporters [BR:
cvg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
107102461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_22
RsgA_GTPase
Rad17
AAA_PrkA
AAA_16
AAA_29
Motif
Other DBs
NCBI-GeneID:
107102461
NCBI-ProteinID:
XP_015257268
Ensembl:
ENSCVAG00000010381
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MATHLNLEAVKELMVTQLRTFFKLCCCRAINRVKWKACSLDGYIGVLCALINRNETINVK
VKPKVCRQLTVSFLWTGGGGRLSLCSLANHQQKVMGVITGLLCIILLDGFLCSARWAGLL
LLKCSSCGGLAGLWAFGLIKWAFLHLFIAVLTSGKHRALLYRFAALLCLISPVFETGRIL
TALPSERYTGPLLDPSMLLLGSTSSLVACLIWEKWISRDGQTKKDNLDTKRLLMRVLRYF
KPDMFYLITAFSFLIMGVIGDTYIPLYQGKVIDMLSERQLQSDFGYTVGHLVLIYSGSAL
FSGMRGGLFMISLARLNKRLKHLLFHNLLKQEVHFFEENNPGRLSSRLHSDVDRMGRTVA
LNANAVVRSTFKTVLMLRVMLGLSWELTLLTCIEMPLLATLQNKYINLSKELKDQTQECH
AQSKDLASQTIGGIRTVRSFNAEKEELRRYLVALEELCSIKRRSAIFSAVYLVIRRVVSL
GIKILMLIQARRLISSGQLSIGNLVSFFLYQKPMSVNLREIMYCYGETMSTVGVISKVLS
YLDRTPKTKEEGNLAPKVLEGRVVFQNINFSYPSAPSEKAALKSVSLEIRPGKITALVGP
SGGGKSSCVSLLKRLYEPQDGQILLDGKPLHCYQGKYFHQKVALVSQNPVLFSGSLKYNI
EYGLEKPPPEEKVKEVARKIDAHKFISEMENGYDTDVGECGGKLSEGQKQSIAIIRALLR
DPQVIILDEATSKLDVDAERAVLDEVLNRGRTILMVAHQLRIVEKADHIIFMEDGSVREE
GTHQELMKKKGGYFRLKEELFSESR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggccactcatctaaatttagaagcagtgaaggagctcatggttacacagctcagaacc
ttttttaagctttgctgttgtagagcaataaaccgagtgaaatggaaggcatgttcatta
gacggttatattggtgttttatgtgcgttaataaatagaaatgaaacaataaacgttaaa
gtgaaaccgaaagtatgtcggcagctaacagttagcttcctgtggacaggaggtggagga
cggttaagcctttgcagtctggccaaccatcaacagaaagtgatgggagtgataacaggg
ttgttgtgcatcattcttctggatggattcctgtgttcagcacggtgggccgggttgctg
ctgctcaaatgttccagctgcggaggactggcaggactgtgggccttcggactgataaaa
tgggcttttctccatcttttcatcgcagtgctgacaagtggaaaacacagagcattgctt
tataggttcgcagcactcctctgtcttatttctccagtgtttgaaactggacggatcctg
actgcacttccctcggaacgatacacaggacctttgctcgatcccagcatgcttttgttg
ggttctacgtcttcattggtggcctgtttaatatgggaaaaatggatttctcgtgatgga
cagacaaagaaagacaatctggacaccaaacgtttgctaatgagagtgctgagatacttc
aaaccagatatgttttatttgataacagctttttctttcctcatcatgggagtcataggt
gatacttacatccctttatatcagggaaaagtcattgacatgctcagtgaacgacagctg
caaagtgactttggttacacagtcggacatctagtgctcatctattctggaagcgccctg
ttctctggcatgagaggaggtcttttcatgatttctttggccagactgaacaagagactg
aaacatctgctctttcacaacctcctgaagcaggaggtgcacttctttgaggagaacaac
ccaggacgactttcctcccgcctgcacagtgatgtggacaggatggggcgaaccgtagcg
ctgaatgctaacgcagtggttcgcagtacgttcaaaactgtcctcatgctcagagtgatg
ttgggcctgtcctgggagctgactttgctcacctgcatagagatgcctctcttggccaca
ttgcagaataaatacatcaacttgtccaaggagctaaaagatcagacccaggaatgccac
gctcagagcaaagacctggcttcccagacgatcggcgggatccgaacagtccgcagcttc
aatgcagagaaagaggaactcaggaggtaccttgtggccctggaagagctgtgctccatc
aagaggcgatcagcaatattcagcgcagtttatcttgtcatacgaagggtggtgtctctg
ggtataaagatattaatgctgatccaagccagacgcctcatctcttctggtcagctcagc
atcggtaatctggtgtcgtttttcctgtaccagaagcccatgtcagtcaatctaagggag
atcatgtattgctatggtgagacgatgtccacagtaggagtcatttccaaagtgctcagt
taccttgacaggacaccaaaaactaaagaggaaggaaacctggctcctaaggtgttggag
gggagagtcgttttccaaaacatcaattttagttatccatctgctccttcagaaaaagcg
gctttaaagtcggtgtcgttggaaatccgcccagggaagatcactgcgctggttggtcca
tctggcggtggaaagagttcctgcgtcagcctgctgaagaggctgtatgagcctcaagac
ggtcaaatcctgctggacggcaagccgctgcactgttaccaaggaaaatacttccatcag
aaggtggcattggtttcccagaatcctgtgctgttttctggttccctgaagtataacata
gagtatggtttggagaaacctcctccagaggagaaggtgaaagaggtcgccaggaagatc
gacgctcacaagttcatctctgaaatggagaatggctacgacacagatgttggagagtgt
ggaggtaaactgtccgaaggccagaagcagagcattgccatcatcagagcgctgcttaga
gacccccaggtcatcatcctggatgaggctacaagcaaactggatgttgatgcagagagg
gcggttctggatgaggttctgaatcgtggacggaccatcctgatggtggctcatcagctc
aggattgtggaaaaggcagatcacatcatcttcatggaggacggatcagtcagggaggag
gggacccaccaggagctcatgaagaaaaaaggaggctactttcgtttaaaggaggagctg
ttttctgaaagcagatga
DBGET
integrated database retrieval system
