Cyprinodon variegatus (sheepshead minnow): 107102463
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Entry
107102463 CDS
T06110
Symbol
chad
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107102463 (chad)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107102463 (chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cvg00535
]
107102463 (chad)
Proteoglycans [BR:
cvg00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
107102463 (chad)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRRNT
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
107102463
NCBI-ProteinID:
XP_015257270
Ensembl:
ENSCVAG00000010390
UniProt:
A0A3Q2CSA5
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MRSVTCMLLLGTCILVLGPAVKGVLSQCPEHCHCHGDLQHVICDNVGLKKIPQVSEATRL
MNLQRNNLGSIPTGAFSTSKGLISLHMQHCQLREIESQAFKGLKKLVYLYLSNNKISSIK
SGAFEDLTELTYLYLDGNQITELSKGIFSPLINLFVLQLNDNRLRELRPGTFAGTKDLRW
LHLSGNELTTLHPGSLDDVENLALFHLDNNKLSTYPTAAMSKLRVVEELMLGRNPMKTIP
DNAFQSFGRYMEKLHLDNMGLERFSAGAFTGVKAMTVLHLHNNKLKSLPSAMQLDTITNM
TLFNNSWSCSCQLAPLRKWMDSQQDETDVICASPPSQKGIKVRDSTVFKTCETKEEQKPK
TKTKAKRKDKGQKTRKGKAGRRH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctgtgacctgcatgctcttgttgggaacctgcatcctagtgttggggcctgcg
gtgaagggagtcctgagccagtgccctgagcattgccactgccatggagacctccaacat
gtcatctgtgacaacgtggggctcaagaagatcccccaggtttcagaggccacccgtctg
atgaacctgcaaaggaacaacctgggcagcatacccacaggggccttcagcacaagcaaa
ggactcatttcgctgcacatgcagcattgccagttgcgagagattgaatcccaggcattc
aagggactgaagaagctcgtctacctctacctgtccaacaacaagataagcagcatcaag
tctggcgcttttgaggatcttaccgagttaacctacctctacctggatggaaaccagatc
actgagctgtctaagggaatattctcccccttaatcaacctctttgttctgcagcttaac
gataacaggctgcgtgaactgcggccaggcacctttgcaggcaccaaggacctgcggtgg
ctgcacctgagtgggaatgagctgacaacactgcatccaggctccctagatgatgtagag
aatctagctctatttcacctagacaacaacaagctgtccacctatcctactgcagccatg
agcaaactgcgagtggtggaggagctcatgctagggaggaaccccatgaagaccatccca
gacaatgcttttcagagttttggacgttacatggagaaactacacctggacaacatgggt
ttggagaggttctctgcaggtgcatttactggtgtaaaagcaatgacggttcttcacctg
cataacaacaagctcaagtcccttcccagtgctatgcagttagacaccatcacaaacatg
acccttttcaacaacagctggagctgctcatgccagctggctccactgcgcaagtggatg
gactcgcagcaagatgaaacagatgttatttgtgcctcacctccttcacagaaagggata
aaagttagagatagcactgttttcaagacgtgcgagaccaaggaagaacaaaagccaaag
acaaagacaaaggcaaagagaaaagacaaaggacaaaagacaaggaaaggcaaggctggc
cgacgtcattga
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