Cyprinodon variegatus (sheepshead minnow): 107102560
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Entry
107102560 CDS
T06110
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6 isoform X1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107102560 (rnf6)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107102560 (rnf6)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107102560 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING-like
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
107102560
NCBI-ProteinID:
XP_015257413
Ensembl:
ENSCVAG00000008102
UniProt:
A0A3Q2CME2
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MDPPGGGSERRRQAERLRREEAYYNFINELSEEEYRLMRDGNLLGTPGEVTAEELRQRLD
GAKERVSSQPHTEQQSQTADAGDQQSSGSGGEERGAAGRGGAGGAEPGAESSNGDSLLEW
LNTFRRTGNATRSGQSGNQTWRAVSRTNPNSGEFRFSLEININHDQPEPGEHIETVSSVD
APELPVIPPNTSVHNASPLSSSRPSATPRPAPYPSPRPAIRRIETRRTRSSATALSVSSA
TLSPAEMAPAAPQRRGSTLHSSAPSPAVPSPPADQTAPFQQQVQNVEVEPGRSQTAASID
CPRVPPQDESQHQAVGQESRSSRTRSRGRARRTATGSGAASRASRRSRSPLNRTSSVSST
QPRISGTTGSTAPPGDPSGVTTSVSMETGGIVSEPDAVLESAVETVERASESPAAGAGSS
AVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARVAENTVTFESDSGGFRRTISRSE
RAGIRTYVSTIRIPLRRISETGLGEPNSTALRSILRQIMTGFGELSSLMETEASSESVTP
SHGYVGVANGGSSRLHLNESGPNQVGTSEVVQGVEGQVSSEEEQVGQARLGAGVVSSADG
RSNSRDTNNLVENGTLPILRLAHFFLLNDEEDDEHPRGLTKEQIDNLSTRTYGQASLEGE
IGRACSVCINEYAQGNKLRRLPCSHEFHVHCIDRWLSENNTCPICRQPILAAHHD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcctggtgggggaagcgaacggagaaggcaggcagagcgtcttcgacgggag
gaggcatactacaacttcattaatgaacttagtgaagaagagtaccgcctgatgagagat
ggcaatctgctggggacccctggcgaggtgactgcagaggagctccgtcagcgtcttgat
ggagcaaaggagcgtgtgtcgtcgcagccccacactgagcaacagtcacagactgctgat
gctggagatcagcagagcagcggcagtggaggagaggagagaggggctgcaggaagagga
ggggcagggggcgcagaacctggagcagaatcttctaatggtgattcattactggagtgg
ctgaatacattcagacgcactggtaatgctactcggagtggccagagtggcaaccagacg
tggagggcggtcagccggaccaatcccaacagtggggaatttcgtttcagcctggagatc
aacattaaccacgaccagcctgagccgggagagcatatagagacggtgagctctgtggac
gccccagagctgccagtgattcctccaaacacctctgtccacaatgcttcccccctctcc
agctctcggccttcagctacaccaaggccggctccgtacccctccccacgccctgccata
agaaggatcgagacccggcgcacacggagcagcgccaccgccctgtctgtgagctccgcc
acactttctcctgcagagatggctccagctgcccctcagaggcgaggatctactttgcac
tcttcagcaccttctcccgccgtccccagtcctcctgccgatcaaacggcgccgtttcaa
cagcaagtccagaatgtagaagtggagccgggacgtagccaaacggccgcttctatagac
tgtcctcgggtgccgcctcaggatgaatctcaacaccaggctgtgggacaggagtcccgt
agcagcaggactcgatcccgtggccgagcgcgcaggaccgcaacggggagcggcgctgca
tctcgtgcatcaaggagaagtcgatcccctttgaacagaacgtctagtgtcagcagcacc
cagccacgcatcagcggtacaactggttctaccgcccctcctggtgatccgagtggtgtc
accacctctgtatccatggagactgggggaattgtttcagaacccgatgctgtgttggag
tcagccgtggaaactgtagagcgtgcgagtgagtcgcccgcagccggagcaggaagctca
gcggtcagacgacatccaaccatcatgctggacttgcaggtgagacggattcgccccggt
gagaacagggaccgggacagcatcgccagcagaactcgatcccgcgcacgggtggcagag
aacacagtcacattcgaaagcgacagcggcgggtttaggcgcaccatctcccgctcggag
cgcgccggaattcgcacctacgtcagcaccatccggattccattaaggcgcatcagcgag
acgggcctcggagagcccaactccaccgcgctgcgctccatcttacgacaaataatgact
ggattcggggagctcagttctctcatggagacggaggcgagttctgagagcgtcacaccc
agccacggatacgttggcgtcgcaaacggcggcagcagtcgcctacatttaaatgagagc
gggcctaaccaggtggggacaagcgaggtcgttcagggggtggaggggcaggtgagcagt
gaggaggagcaggttgggcaggccagacttggggccggagtagtcagctctgcagacgga
cggtcaaacagcagagacaccaacaacctggtggagaacggcaccctgcccatcctgagg
ctggcacatttctttctactcaacgacgaggaagatgacgaacatcccagaggcctgacc
aaagagcagatcgacaatctatccacgcgtacctacggtcaggccagcctcgaaggcgag
atcggacgcgcctgcagcgtgtgcatcaacgaatacgcccaaggcaacaagctgcgtcgc
ttgccctgctcccacgagttccacgtccactgtatcgatcgctggctctccgaaaacaac
acctgccccatctgcaggcagcccattctggcagcgcatcatgactga
DBGET
integrated database retrieval system
