Cyprinodon variegatus (sheepshead minnow): 107102653
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Entry
107102653 CDS
T06110
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107102653
Transcription factors [BR:
cvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107102653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107102653
NCBI-ProteinID:
XP_015257526
Ensembl:
ENSCVAG00000001650
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MYNMMETEIKTPLPQSNSGSAPGAKNSSASDQERVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANPVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHSMNSPQIQQM
HRYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQSSSAMGLSSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSAEHSSLQSSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagatcaagaccccgctcccgcagtccaactcgggctcg
gcgccgggcgcaaagaacagcagtgccagcgaccaggagcgggtgaagcggccgatgaac
gctttcatggtctggtcccggggacagagaaggaagatggcccaagaaaaccccaaaatg
cacaactctgaaatcagcaagcggcttggcgctgactggaaacttctgacagacgccgaa
aaaaggccgttcattgacgaggccaagcgtttacgcgcaatgcacatgaaggaacacccg
gattataaataccggccccgcaggaagaccaagaccttgctcaagaaagacaagtattct
ctgcctggagggctgctggcgccaggagccaaccccgtcaacaactctgtgtcggtgggc
cagcggatggacggttacgcgcacatgaacggctggacgaacagcgcgtattccctgatg
caggaccagctggcctaccctcagcatcacagcatgaacagcccgcagatccaacagatg
caccggtacgaaatggccggccttcagtacccgatgatgtcctcggcgcagacctacatg
aacgcggcgtccacctacagcatgtctccagcttacacgcagcagagcagcagcgccatg
gggctgagctccatggcgtccgtgtgcaagacggaacccagctcacccccgccggccatc
acgtcccactctcagcgggcgtgtttgggggacctgagggacatgatcagcatgtacctg
ccccccggcggggacagcgcagagcattcctccctgcagagcagccggttacacagcgtc
catccacactatcagagcgcagggactggcgtcaacgggacgctacctctcacccacatc
tga
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integrated database retrieval system
