Cyprinodon variegatus (sheepshead minnow): 107102670
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Entry
107102670 CDS
T06110
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107102670
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107102670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
107102670
NCBI-ProteinID:
XP_015257544
Ensembl:
ENSCVAG00000001516
UniProt:
A0A3Q2FCN4
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MKADVGFPPAAQLWNRSTATHPDVCGWQPSRPCGPREKMLEPSDPRLLQDQLDFFHKLGF
STAQVQAVQQKFGTDTDKVLGELVRMGAGQEAKPGPVTTVSVLMPRGDAKDGAPELLLPI
HSREDGGEDGDALRAVVIDGSNVAMSHGNKEVFSCLGIQLAVNFFLDRGHTDVTVFVPSW
RKEQPRPDVPITDQHILRELEKKKILVFTPSRRVAGKRVVCNDDCFIVKHAFESDGVVVS
NDMYRDLQGEKPEWKRFIERRLLMYSFVNNKFMPPDDPLGRHGPNLENFLRKFPKTQKKQ
PCPYGKKCTFGIKCKFLHPERSKQSNRAVADDLRENAKNPAAAQKPARRSPALDLSLTLM
EDMAQKLTLGPEGGSAKRQDPKGGHRSGKKAQSRREKTGQHSERTSKRPDGSQEPLDSGL
GSIDSQQLETAWRLPDQKYEASVGTGPHRFCPSAGTVCSCCSHDLFQPSRMVPVGSRSAD
LTRYGPPAYPSCALVPPGRTAYSQPAELLPGRVHQHWSDPFSGPPPEARSLPGEGCAWEA
APSPSPGPGPKDREVVRKKLLAIFSAQLVDAAMDLFPQVLDPQVLVAEILILQSQNRSLR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagatgttggtttcccaccagctgcgcagctgtggaacagatccaccgccaca
cacccagacgtctgtggatggcagccgtcccgcccctgtgggccccgtgagaagatgctg
gagccatcggacccccggctcctccaggaccagctggacttcttccataagctgggattc
tccacggctcaggttcaggccgtccagcagaagtttggcaccgacacggacaaggtgctg
ggagagctggttcggatgggggccggtcaggaggccaagccgggaccagtgaccaccgtc
tctgtgctgatgcccaggggggacgccaaggatggggcccctgagctgctgctaccgatc
cacagcagagaagacggcggagaggacggggacgctctgagggccgtggtgatagacggc
agcaacgtggccatgagccacggcaacaaagaagtcttctcctgcctggggatccagctg
gcggtgaacttcttcctggaccggggccacaccgacgtcaccgtatttgtgccgtcatgg
agaaaagagcagccgaggccagacgttcccatcacagatcagcacatcctgagggagctg
gagaagaagaagattctggtcttcacgccgtcccgccgagtggcaggaaaacgcgtcgtc
tgcaacgacgactgctttatcgtcaagcacgccttcgagtcagacggcgtggtcgtgtcc
aacgacatgtaccgtgacctgcagggggagaagcccgagtggaagcgcttcatcgagaga
aggctgctcatgtactccttcgtcaacaacaagtttatgcctcctgacgatcctctgggc
cgacacggacccaacctggagaacttcctgagaaagttcccaaaaactcagaagaagcag
ccatgtccttatgggaagaaatgcacctttgggatcaaatgtaaattcctccatccggag
cgaagcaagcagtccaaccgggccgtggctgacgacctccgggagaacgccaagaacccc
gcggccgctcagaaacccgcccgccgcagtccggctctggacctcagcctgactctgatg
gaggacatggcccagaagctgactctggggcccgagggcggctccgcaaagagacaggat
ccgaagggggggcaccgctccgggaaaaaggcccagagcaggagggagaaaacgggccag
cattcggagcggacctccaagaggcccgacggctcccaggagccgctggactctggtttg
ggctccatagacagtcagcagctggagacggcctggagactccctgaccagaagtacgag
gcatccgtcggaaccggcccgcaccggttctgcccctcagccggcaccgtctgcagctgc
tgctcacacgacctgttccagcccagcaggatggtaccagtgggcagccgcagcgcggat
ctgacccgctatggcccgcccgcctatcccagctgtgctctggttccgcccggcagaacc
gcttacagtcagcctgcagaactccttcctggcagagtccatcagcactggtccgaccca
ttcagtggtccccctccagaggcccgcagcctgccgggggaaggctgcgcgtgggaggcc
gctccgagtccgagtccaggtcccggtccaaaggacagggaggttgtccggaagaagctc
ctggccatcttcagcgcccagctggtggacgctgccatggacctcttccctcaggttctg
gaccctcaggttctggtggcagagatcctgatcctccagagtcagaaccggtccctgaga
taa
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