Cyprinodon variegatus (sheepshead minnow): 107102691
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Entry
107102691 CDS
T06110
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04140
Autophagy - animal
cvg04148
Efferocytosis
cvg05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107102691 (vps11)
04148 Efferocytosis
107102691 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107102691 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107102691 (vps11)
Membrane trafficking [BR:
cvg04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107102691 (vps11)
Hops complex
107102691 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-RING_5
TPR_GEMI5
zf-ANAPC11
WD40_Prp19
Kbp-5
Beta-prop_EML_2
zf-RING-like
zf_RING_Vps8_fungal
ToxA_N
Motif
Other DBs
NCBI-GeneID:
107102691
NCBI-ProteinID:
XP_015257580
Ensembl:
ENSCVAG00000001394
UniProt:
A0A3Q2FCG6
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MAAFLQWRKFVFFDKDAVKDPTDGGKLLLLPKGISASDSGRGHIVLGDMEGQIWLLPRSL
QLTSFQAYKLRVTHLFQLKQHSILVSVGQDEQGINPLVKVWNLDKRDSGNPLCTRIFPAV
PSNKPAEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGGCPVTGLAFR
QMAKVTHLFVATLEKVFCYTLSIKEYPRVELDTHGCALRCSSLADPSQDSQFIVAGDDCV
YLYQPDERGPCFAFDGHKLLAHWHRGYLFLLNRDLKSPSKSGFGSGGESSPSEKQVLTIY
DLDNKFIAYSASFDDVIDVLAEWGSFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMAI
NLAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIH
NLTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQ
AGYHSHAVFLAERHQHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQTESNMKRYGKTLMHH
VPEGTTALLKRLCTNYQPTGDCVEKANSEEFIPIFANNPRELKAFLEHMIEVDPRSSQGV
YDTLLELRLQDWAHEKDPKEKAVRQGEALSLLRSDNTVFDKALVLCQMHNFKEGVLYLYE
KGQLYQQIMHYHMQNEEYGKVVDACKRYGEQEGCLWEQALGYFARKEEDCKAYISEVLDH
IDQKNLMPPLLVVQTLAHNSTATLSVIKDYLINELQRESQQIEDDERKISQYREETAHLR
SEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESDAECPTCTPEN
RKVMDLLRAQDQKRDLHEHFSRQLRSSNDGFSVVADYFGRGVFNKLTLVTDPPGSKAVGS
LEVSLQRDLLIHTKRNS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtttctacagtggaggaagtttgttttcttcgataaggacgcggtgaaggat
cccacagatggagggaaacttctgcttcttcccaaaggaatttcagccagcgactccggc
cgcggccatattgttttgggagatatggaaggccagatctggctgctgccgcgctccctg
cagctcacgtctttccaggcgtacaagctgcgggtcactcacctgttccagctgaagcag
cacagcatcctggtgtcggtggggcaggatgaacaaggcatcaaccctctggtgaaggtc
tggaacctggacaagagagacagtgggaacccgctgtgcaccaggatcttccctgcagtt
cccagtaacaaacctgcagaggtgtcctgccttagtgtccatgagaacctgaacttcatg
gctattggcttcacggacggcagcgtggttctgaccaaaggggacatcaccagagaccgc
cacagtaaaacgctgaccttgcacgagggcggctgccccgtcacgggcctggccttccgc
caaatggccaaagtgacgcacctgtttgtggcgactctggagaaagtcttttgctacact
ctgtccatcaaggagtatcccagggtggagctggacacccacggctgcgccctgcgctgc
tcctctctggccgatccgtcccaggactcccagttcattgttgccggggacgactgcgtg
tacctgtaccagcctgatgagcgggggccatgtttcgccttcgatggccacaagctgctg
gcccactggcaccggggctacctgttcctcctcaacagagacctgaagtcacccagcaag
tcagggttcggcagcggcggcgagagctcgccgtcagagaagcaggttttaaccatctat
gacctggacaacaaattcatcgcctacagtgcctcgttcgatgatgtcatcgacgtgttg
gccgagtggggctccttctacattctgaccagagacggaaaaatgtttgttcttcaggag
aaagacacgcagaccaaactggagatgctgttcaagaagaacctgtttgtcatggccatc
aacctggctaagagtcagcacctggacagcgacgggctgtcagagatcttccgacagtac
ggtgaccacctgtacctgaagggagaccacgatggcgccatccagcagtacattagaacc
atcgggaagctggagccttcgtacgtcatcaggaaattcctggatgcccagaggattcac
aacctcacagcgtacctgcaggccctccaccgccagtccctggccaacgccgaccacacc
accctgctgctcaactgctacaccaagctgaaggacagctccaagctggaggagttcatc
aagagcagtgagagtgaggtccacttcgacgtggagatcgccatcaaggttctccgtcag
gccgggtaccacagtcacgccgtgttcctggctgagcgccatcagcaccatgagtggtac
ctgaagatccagctggaggacctgaagaactatcaggagggtctgcgctacatcggccgc
ctgcctttcgaacagaccgagagcaacatgaagcgctatggaaagacgctcatgcaccac
gttcctgaaggcaccactgctctgctgaagcgcctgtgcaccaactaccagcccactgga
gactgtgtggagaaggcaaattctgaagaatttatccccatttttgccaataatcctcga
gagttgaaagccttcctggagcacatgatcgaggtggacccgcgctcatcgcagggcgtg
tacgacacgctgctggagctccgcctgcaggactgggcacacgaaaaagacccaaaggag
aaagcggtgcggcagggagaggcgctgtcgctgctccggagcgacaacactgtgttcgat
aaggccttggtgctctgccagatgcacaactttaaagaaggagtcctctacctgtacgag
aaaggccagctgtaccagcagatcatgcactaccacatgcagaacgaggagtacgggaag
gtggtggatgcctgtaagcgctacggagagcaggagggctgcctctgggagcaggctctg
ggatactttgccaggaaggaggaggactgtaaggcctacatcagcgaggtcctcgatcac
attgaccagaagaacctgatgcctccattactggtcgtgcagacgcttgcccacaactcc
acggccaccctgtctgtgatcaaagactacctcatcaatgagctgcagagagagagccag
cagatcgaagacgacgagcggaagatcagccagtaccgcgaggaaaccgctcaccttcgc
tctgaaatccaggagctgaagaccagtgccaagatattccagaagaccaagtgcaacatg
tgcaacagccccctggagctcccgtctgtccacttcctgtgcagccattccttccaccag
cactgctttgagagttacgccgagagtgacgcagagtgtccaacatgcactccagaaaac
cgcaaagtcatggatttgctgcgcgctcaggaccagaagcgggatcttcatgagcacttc
agtagacagctgcggagctccaatgacggtttttctgtggtggctgattactttggtcga
ggagtgttcaacaagctgacgctggtcaccgaccctccagggagcaaagctgtggggagt
ctggaggtcagcctgcagcgagacctgctgatccacaccaagaggaacagctga
DBGET
integrated database retrieval system
