KEGG   Cyprinodon variegatus (sheepshead minnow): 107102714
Entry
107102714         CDS       T06110                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03020  RNA polymerase
cvg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107102714 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107102714 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvg03021]
    107102714 (polr2d)
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107102714 (polr2d)
Transcription machinery [BR:cvg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     107102714 (polr2d)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107102714 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Rop Maelstrom
Other DBs
NCBI-GeneID: 107102714
NCBI-ProteinID: XP_015257606
Ensembl: ENSCVAG00000000779
UniProt: A0A3Q2C718
LinkDB
Position
Unknown
AA seq 144 aa
MAAGGSSVPPQLGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELSSLANLCPEAAEEAKALIPSL
EGRFEDEELQQILDDIQTKRSFQY
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcggctggaggcagttcggttcctccgcagctcggagacgtagaagaagacgcttct
cagctgctgtttcctaaagagtttgagaacgctgagaccctgctgaactctgaggtccac
atgctgctggagcaccgaaagcagcagaacgagagcgcagaggacgagcaggagctgtcc
gaggtcttcatgaagacgctcaactacacggcccggttcagccgcttcaagaaccgcgag
accatcaccgccgtgcgcagtctcctcctgcagaagaagctccataagttcgagctgtcc
agtttggccaatctgtgtccagaagcagctgaagaagccaaggctctgatccccagtttg
gagggacgctttgaggatgaggagctgcagcagatcctggacgacatccagaccaagaga
agcttccagtactga

DBGET integrated database retrieval system