KEGG   Cyprinodon variegatus (sheepshead minnow): 107102742
Entry
107102742         CDS       T06110                                 
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03030  DNA replication
cvg03420  Nucleotide excision repair
cvg03430  Mismatch repair
cvg03440  Homologous recombination
cvg03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107102742 (rpa3)
   03420 Nucleotide excision repair
    107102742 (rpa3)
   03430 Mismatch repair
    107102742 (rpa3)
   03440 Homologous recombination
    107102742 (rpa3)
   03460 Fanconi anemia pathway
    107102742 (rpa3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cvg03032]
    107102742 (rpa3)
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107102742 (rpa3)
DNA replication proteins [BR:cvg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    107102742 (rpa3)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     107102742 (rpa3)
   MMR (mismatch excision repair)
     107102742 (rpa3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     107102742 (rpa3)
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 107102742
NCBI-ProteinID: XP_015257644
Ensembl: ENSCVAG00000001236
UniProt: A0A3Q2C6V8
LinkDB
Position
Unknown
AA seq 122 aa
MAGILDVPKPRINCSMLSRFINRAVCFVGRVEKVHPSGKMFTVVDGESKTATVELNEPLE
EELSGVVEVIGMVSNKGDIMASTYNTLREDRGVPFDLELYNEALKVIHDFPQHYPFQVAA
SG
NT seq 369 nt   +upstreamnt  +downstreamnt
atggccggcatcctggacgtcccaaagcccagaataaactgctccatgctgtcccggttc
atcaaccgagccgtctgcttcgtcgggcgggtagaaaaggttcatccgtctgggaaaatg
ttcaccgtggtggacggagagagtaagaccgccacagtggagctgaacgaaccgcttgaa
gaagagctgagtggagtggtggaggttattgggatggtgtccaacaaaggagacataatg
gccagcacatacaacaccctgagggaggacaggggcgtccccttcgatttagagctgtac
aacgaagcgctgaaggtcatccacgacttcccccagcactaccccttccaggtggctgcc
agcggatga

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