Cyprinodon variegatus (sheepshead minnow): 107102797
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Entry
107102797 CDS
T06110
Symbol
mars
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00450
Selenocompound metabolism
cvg00970
Aminoacyl-tRNA biosynthesis
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
107102797 (mars)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107102797 (mars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cvg01007
]
107102797 (mars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvg03016
]
107102797 (mars)
Enzymes [BR:
cvg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
107102797 (mars)
Amino acid related enzymes [BR:
cvg01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107102797 (mars)
Transfer RNA biogenesis [BR:
cvg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107102797 (mars)
Prokaryotic type
Other AARSs
107102797 (mars)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C_2
GST_C
HTH_23
GST_N_3
GST_C_6
tRNA-synt_1e
GST_N_2
GST_N_4
Motif
Other DBs
NCBI-GeneID:
107102797
NCBI-ProteinID:
XP_015257718
Ensembl:
ENSCVAG00000009314
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MMELFVSEGNPHCLKVLAALEVTGVQCGVHFINHEEKVVPFLSRPALPALLLPSKQHIFS
SNTICRYLFELNGPESSDQCNQWLEWEATVLQPALLRALHMAVLQGKGSEVSKVLQSPLN
VLDQSLGKGNMSYLTGKDVSVADIVLWGALHPVLFNSSLALSDHKFVKAWFDRVAAMSGC
QSAAQKVLQGKGLEAMKSYMQRQPAPQSRDTQPCNSSPVESEEGERVVSEEEMEAAALTW
RKDINACSQTTEKQHPIMPKEGMRNVLITSALPYVNNVPHLGNIIGCVLSADVFSRYGRL
RGWNVLFVCGTDEYGTATENKAREEGLTPKQICDKYHAVHSSIYRWFQIDFDFFGRTTTE
KQTEIAQDIFWRLQKNGFLVEDTVEQLRCENCQRFLADRFVEGICPHCSYPEARGDQCDK
CGRLINAVELREPQCKVCKQTPVIRSSKHLFLDLPKLETQLEQWLEKSTSSGDWTANAKQ
ITRSWLRDGLKPRCITRDLQWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTSDWEKWW
KNPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLVATEYLNYEDTKFSKSRGV
GVFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRAGMF
VTKFFGGCVPEMELQQEDKKLLAVVGWELQQYIQLMDKVKIRDALKHILNISRHGNQYIQ
VNEPWKKIKGGESERRRAGTVTGVSVNISCLLSVMLLPYMPAVSQTIRDQLNAPQSCINT
MLLGPGSFVCALRAGHRIGTVSPLFQKLEADQIEALKKRFGGQQPEDEPSNKKITASSQQ
PAVVPAPPAVAEVKTGVGADPEKAKQLAKAVAEQGDKVRALKSQKAEKDVIAAEVSKLLD
LKKQLALAEGKSPEPAAQKGKKK
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctgtttgttagtgaaggcaacccgcattgtctgaaggtgttagccgctctg
gaagtgacaggagttcaatgcggcgttcattttatcaaccacgaagagaaagtggtgcct
tttctcagccgtccagctttgcccgcccttctcctgccaagcaaacagcacattttcagc
tccaacactatctgcagatatctgtttgagttaaatggaccagaatccagtgaccagtgc
aaccaatggcttgagtgggaagccacggttcttcagcctgcactgctacgggctcttcac
atggccgtgcttcagggaaaaggatcagaggtgtccaaggtccttcagagtcctctaaat
gtcttggaccaaagccttggcaagggaaacatgtcatatttaactgggaaagatgtttca
gttgctgatattgtattatggggtgcactacaccctgttttattcaactcatctctggct
ttgagcgatcataagtttgtgaaggcctggtttgaccgtgttgctgccatgagtggttgt
cagtctgcggctcaaaaagtgctgcagggaaaaggcctggaggccatgaagagctacatg
cagagacagcctgcacctcagagcagagacacacagccatgcaacagcagccctgttgag
agtgaagaaggtgagcgtgttgtttcagaggaggaaatggaagcggcagctctgacctgg
aggaaggatataaacgcctgctctcagacaacagaaaaacaacatccaattatgccaaag
gagggcatgaggaacgtcctgatcaccagcgccttgccatatgtcaacaatgttccccac
ctgggtaacatcattggctgtgtcctcagtgcagatgtcttctccaggtatggccgcctg
cggggttggaatgtgttgtttgtctgtggcacagacgagtatggaacagctaccgagaac
aaggccagagaggagggactgacgccgaagcagatatgtgacaagtaccatgctgttcac
tccagcatctacagatggttccagattgactttgacttctttgggagaaccaccacagag
aagcagacagagatcgctcaggatattttctggcgactccagaaaaatgggttccttgta
gaagacacggtggagcagcttcgctgtgaaaactgtcaacggttcctggctgaccgcttc
gtagagggtatatgtccccactgcagttatccagaggctcgaggcgatcagtgtgacaag
tgtgggcggctcatcaacgccgtggagcttagggaacctcagtgtaaagtctgcaagcag
actccagtaatccgctcttccaagcatcttttcttggacctgccaaagcttgaaactcaa
ctggagcagtggttggagaaatcaaccagctcaggagactggacagcaaacgccaaacaa
ataactcgctcctggctaagagatggactcaagcctcgctgcatcaccagggacttgcag
tggggaacgccagtacctcaccctgactttaaagagaaggtgttctacgtgtggtttgac
gcccctattggctacctgtctattactgccaactacaccagcgattgggaaaagtggtgg
aaaaatccgcatcaggtggagctgtataactttatggcaaaggacaatgtgccattccac
agtgtggtgtttccctgctcccttctgggagcccaggacaactacactctggttaaccat
ctagttgccactgaatatcttaattacgaggacaccaagttctctaagagcaggggtgtt
ggtgtgtttggagacatggcaaaggacacgggcatcccctcagatgtatggcgtttctac
ctgctgtacgtccgtccagaaggacaagattcagctttttcttgggctgatatggcttta
aaaaacaactctgagctgcttaacaatctgggaaacttcatcaacagggctggcatgttt
gtgaccaagttctttggaggatgtgtgcctgaaatggagctacagcaggaagacaagaag
ctcctggctgtggtgggctgggagttacagcaatacatccagctgatggacaaagtcaag
atccgcgatgccctgaaacacatcctgaacatttctcgccatggtaaccaatacattcaa
gtcaatgagccttggaagaaaataaagggaggagagtcagaaaggcggcgcgccggcacc
gtgacgggggtttctgtgaatatctcctgcttgctgtcggtgatgctcctgccttacatg
ccagcggtcagccagactatcagggatcagctcaacgctcctcagtcttgcatcaatacc
atgctgctaggccccggctccttcgtgtgcgccctgagagcgggtcaccgcatcggcacc
gtcagtccgttattccagaaactggaggcggatcagatcgaagctttgaagaagaggttt
ggtggacagcagccagaagacgaaccatctaataagaagatcactgccagcagtcagcag
cccgctgttgttcccgctcctcccgctgttgctgaagtaaagacgggggtcggagcggac
ccagagaaggctaagcagcttgcaaaagctgtagcggaacagggcgacaaggtacgagcg
ctcaaatcccagaaagcagagaaggatgtgatcgcagcagaggtttccaaacttttagat
cttaagaaacaactggctcttgctgaagggaagagccctgaacctgcagctcagaaaggc
aagaagaagtaa
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