Cyprinodon variegatus (sheepshead minnow): 107102808
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Entry
107102808 CDS
T06110
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04145
Phagosome
cvg04514
Cell adhesion molecule (CAM) interaction
cvg04517
IgSF CAM signaling
cvg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
107102808
04517 IgSF CAM signaling
107102808
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107102808
09142 Cell motility
04810 Regulation of actin cytoskeleton
107102808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107102808
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107102808
04515 Cell adhesion molecules [BR:
cvg04515
]
107102808
04090 CD molecules [BR:
cvg04090
]
107102808
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
107102808
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107102808
Cell adhesion molecules [BR:
cvg04515
]
Integrins
Integrin beta subunits
107102808
CD molecules [BR:
cvg04090
]
Proteins
107102808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
vWA_SIBA-E
I-EGF_1
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
107102808
NCBI-ProteinID:
XP_015257730
Ensembl:
ENSCVAG00000017733
UniProt:
A0A3Q2GMT7
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MDLCMLSLLLLMLGKHGFCHQEEVCTNSVTDSCDGCITFKPFCAWCQQLNFTKPGEQETV
RCGTKAKLIERGCKPEEIISPQNHEIILQKDPLSQSSDTEEPVQMSPQKIHLKLRPGLPH
SFNVTFKRAEGYPVDLYYLMDLSYSMKDDLENVKGLGKTLFDALNSITKKAKIGFGAFVD
KTVLPYTNTNKEKLKKPCDENDDQCQAAFGYRHVLSMTSSEEQFREEVAKQYISGNLDSP
EGSLDAMMQAAVCGDQIGWRNSSTRLIVLATDAGFHMAGDGKLAGILEPHDEQCHMKNNL
YVKSNEMDYPSVGQLAIQLEKNNVQPIFAVTENVKDVYTKLSKIIPKSEVGVLSSDSKNV
VQLIESAYKKLSSKVTVTHDVLPENVQVKYLPVCDHPREEGTNKGVCDQVGEGKEIYFQV
TVTAKTCIEQESFTISPLGIKDKLTVTISTNCTCECNNHGESNQKHCNNNGRINCGVCSC
NDGFSGQRCGCNVTTQNLETLQALCRRDNGTECEGRGDCLCGSCKCHEAEQGFSYYGKFC
ECDDEHCEKFNNKKCAGNGDCKCGKCECFDGWEGSACQCSRTLTEGCRPPPSSSTGNNTI
CFGRGSCKCNLCECDEGYQRPFCEKCEGCDDVCQTKMKCIECLFVNSDVSKEDCKVVCGG
SMSHTLVENFTYQGKDCNQKDSQGCRIKFKLEQLSGRDNYKAEILKIKDCPEPQSVMPII
IGSIAAVAVIGILLLMLIKFLYYLKDLKEFKRFENERQKTKWDEIDNPLFQNPTTTVANP
LFTGEN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtgcatgctttcactcctgctcctcatgttgggcaaacatgggttttgccac
caagaggaagtctgcacaaattcagtaaccgactcctgtgatggctgcatcacatttaag
ccattctgtgcatggtgtcaacagctgaattttacaaaacctggtgagcaagaaacagtt
cgctgtggcactaaagcaaagctgattgaaagaggatgcaaaccagaagagatcatttcc
ccccagaaccatgagatcatcttacagaaagaccctctgtcccaatcgtctgacacagaa
gagcctgtgcaaatgagtccgcaaaaaatccacctgaaactccgacctgggcttccacac
tctttcaatgtcacctttaagagggctgagggttacccagtggatctttactacctgatg
gatctctcctactccatgaaggatgatctggaaaatgtcaaaggcctaggaaaaaccctt
tttgatgctttgaatagcattacgaaaaaggctaaaatagggttcggtgcctttgttgat
aagacagtgcttccttatacaaacaccaacaaggagaaactgaagaagccatgtgatgag
aatgacgatcaatgtcaggctgcctttggctacagacatgttcttagtatgacatcgagc
gaggaacagttcagagaggaggtggcaaagcagtacatttctggaaacttagactctcct
gaaggaagtcttgatgccatgatgcaagcggctgtatgtggggatcaaataggctggaga
aacagcagcactcggttaattgttctggccacagatgctggatttcacatggctggggat
ggaaaactggctggcatcctagaaccccatgatgaacagtgccacatgaaaaacaacctt
tatgtcaaaagtaatgagatggactacccatctgttggacagttggccattcagctggaa
aaaaacaatgttcagccaatatttgctgtaacagaaaatgtgaaggatgtgtacacaaaa
ctctcaaaaattataccaaagtcagaagtgggagttctgtcatcggattcaaaaaatgtg
gttcaactgattgaaagtgcctacaagaaattatcctctaaagtcacagtgacacatgat
gttcttcctgaaaatgtacaagttaaatacctgccagtgtgtgatcatcccagagaagaa
ggcacaaataaaggggtctgtgatcaagtcggtgagggaaaagagatatactttcaggtt
acggtcacagcaaaaacatgcatagagcaggagtccttcactatcagcccacttggtatt
aaagataaactgacagtaaccatatctaccaactgtacgtgtgaatgtaacaaccatgga
gaaagcaatcaaaaacactgcaacaataacggaagaattaactgtggtgtatgcagctgc
aatgatggtttttcgggacagaggtgtggctgtaatgtaacaacacaaaatttagaaact
ctgcaagcattatgtcggagggataatggaacagaatgtgagggcagaggagattgttta
tgtggctcatgtaagtgtcatgaagcagagcaaggattctcttactatggaaaattctgc
gaatgtgatgatgaacattgcgaaaaattcaacaataagaaatgtgcaggaaatggtgat
tgtaaatgtggaaagtgcgaatgctttgatggctgggagggctctgcatgtcaatgcagc
aggactttaacggagggatgtcgtcctccaccgtcatcctccacaggcaacaacactatc
tgctttggcagagggagctgcaaatgtaacctttgtgaatgtgatgagggatatcagcgc
ccattctgtgagaaatgtgaaggctgtgatgatgtatgccagacaaaaatgaaatgcatt
gaatgccttttcgttaattcagatgtttcgaaagaagactgcaaagtcgtttgtggggga
agcatgtcccataccttggttgaaaattttacttatcagggtaaagattgcaaccagaag
gacagtcagggttgtcggatcaaattcaagctggagcagttatccggaagggataactac
aaagctgaaatactgaaaataaaagattgcccagaaccacagagtgttatgcctatcata
attggatccattgctgcggtggctgtaattgggattcttctgctgatgctgatcaagttt
ttatactacctgaaagacctgaaagagttcaagaggtttgaaaatgaaagacagaaaacc
aagtgggatgagatcgacaatccactgttccagaatcccactaccactgtggctaaccct
ctgtttactggagagaattaa
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