Cyprinodon variegatus (sheepshead minnow): 107102867
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Entry
107102867 CDS
T06110
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107102867 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107102867 (nup98)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107102867 (nup98)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107102867 (nup98)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107102867 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
107102867
NCBI-ProteinID:
XP_015257798
Ensembl:
ENSCVAG00000016352
UniProt:
A0A3Q2EB38
LinkDB
All DBs
Position
Unknown
AA seq
1810 aa
AA seq
DB search
MFNSSFNTPFGGTTGGFGTTSTFGQQNTGFGTTGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGAASGTSTSLFGNTATNTGGGLFSQQNNAFGANKPNSFG
SFGTSTSSGGLFGSTNTTTNPFGGTTLFGGSGFSANQQPGTTVKFAPPTGSDTMVKAGVT
TSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPGTGGLFGGATPTSSASTG
LFGASASNTNFNFGANKSTFGATTGSFGTNAGNLFAQPNQQAAGSLFKPFGATTTTQSAG
FNFANTNTIGQPNTSSMGLFGSTAASQPGGLFGNTQTSTTTGFGTGTGLFAQPNAGFGNV
GTQPSLFGNKASGFGTTTTSAQSFGTGTLFGNKPALTLGTGTNTSNFGFGTNQAGGGLFG
NKTATGGLGAGLGTGFGTVGTGTTLFGNNQNKLGTTLGTMGAFGTTGFNSGGTGLGFGAP
QQPVALTDPNANAAQQAMLQQQLNVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTAQK
ALTTPTHYKLTPRPATKVRPKALTSSGASKSQLFDGLDDDEPSLTNGAFVPRKSIKKLVL
KNLNSSQYSNSSLNKENDDLASPSDYPQNGHSQVEEEDIREVPGVSNRTDDDPEVTQFYV
NPIAKPIPQGRVQSSLQDTISDLNMHKQPRNGLELSSDDVSASFGEDSLQEEEEEEEQQQ
EPKQSPHPAGIVLNKMGYYTIPSLDDLAEMVDENGECVVENFTIGRKGYGSIFFPGEVNL
TGLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTTCAQIRSPERL
TDMNYEGRLEKASRRQGARFLEYRPETGSWVFEVTHFSKYGLQDSDEDDDVPPKTDPKKL
KTMMSLPASRLQQLLPPSQQQVAPQAQSTAVDLASGMAELDSDMADITQSVPMESILGAE
DGELPLDDTELSKLGGEVLADHELTGSSHIPSSLGINPHTLQIMKASLFTEEEEDDMFQN
RTKGSTDTSSPRVILSGPLGRPPVGGLLQARFSTSQRLDSPRPSALADPPRPMQWKSPGP
ASFLLPPRVPEPAIRTVGVRRLGGPVPLKESVTQGKGALLMDTGLFATRSFRVGWGPGWT
LAHCGSRLGSQNQHQEVGSKTDFSFMPKPSRNKPLAESPFKVVLEQLVGLEPLQRKTSEE
EEEEEDSNAVLQRPLEICLKNSTVSIPEGGACPLVEPQSGVAALHEYAEWITELRERRDD
AEPVLAHWAEVWTLCEALWGRLGPSHQESEPEPLGEYEQQLQRRRAFSAWLSHGASCRVE
KEVALVGRSRHTEAVFSYLTGSRISEACRVAQKEGDHRLALLLSQAVGSQFCRDLLGLQL
ADWNRMQTDHYMTEDRLRIFVLLAGKAVWQSSESAVNVCSELDWKRCLALHLWYMLPPTA
SVADALAKYEAAFQGSTEAGRYACAPLPPYQEAELPDEEEEESERPLYDLCFHLLKLYSD
RHYSLQPLLDPLTVTWRRLDYRLSWHLWGVLQALNYSHLSVCRQGLVHASYAAQLESAGL
WHMAVFILLHIPDHSQRERAVREMLTLHCPLLETEESVRRERFLTERLLIPESWIHEAKA
IRAHRDGDRRQQALHLYRAGYWNQCHRLLIQHLASDCIINDDHDYLLEFLEGLAVPEHSA
SIQDWDTAGRVYLDYIRVIKCLQDIQQMENTGYELERLYADVTSLCSRIELLPCRTAKDR
LAQSEMAKRVANILRVVLSLQQGDGAADPLSIPLAQLAPHISRLPMPEDYTLEELRGLTQ
SYLRQLVVSQ
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagttcatttaacactcccttcggcgggacgacagggggcttcggcaccaca
tcaaccttcggtcagcaaaacacaggttttgggacgacgggaggatttgggacgtctgcg
tttggggcgaccaccaacaccggcggactgtttggctccacgcagaacaaacccggcggc
ctatttggatccagcaccttcagccagccggccacctcctccaccagcactggttttggc
tttggcgccgccagcggaacgtccaccagcctgtttggaaacacagcaaccaacaccggt
ggcgggcttttctcccagcagaacaatgcattcggcgccaacaaaccaaattcttttgga
agctttgggaccagtaccagcagtggtggcctgtttgggtccaccaacaccaccaccaac
cctttcggtggtaccaccctgtttggaggctctggcttttcagccaatcagcagccaggg
acaacagtgaagttcgctcctccaacaggaagtgacaccatggtcaaagctggcgtgacc
acgagcataaacaccaaacatcagtgcatcacagccatgaaggaatacgagaacaagtct
ctggaggaactgaggctggaggactaccaggcgggcaggaagggccccacaaacccgatg
gccccggggacgggcggcctgtttggtggagccacgcccacgtccagcgcctcaacggga
ctgttcggtgcctccgcctccaacaccaactttaactttggggcaaacaagtccacattt
ggtgccactacaggctccttcggaaccaacgcagggaatctgtttgcacagcccaaccag
caggcggccggcagcctcttcaagccctttggagcaaccaccaccacccagagtgccggc
ttcaacttcgccaacaccaacaccataggccagcccaacaccagcagcatgggtttgttt
ggaagcacggcggcttctcaacccggcggcctgtttggaaacacccagaccagcaccacc
actgggtttggaacgggaaccgggctttttgcacaaccaaacgctggctttggaaacgtc
ggcacacagcccagtttgttcgggaacaaagcctctggctttggaaccacgaccacaagt
gctcagtctttcggcaccggtactctctttgggaacaagcccgccctgactctgggaacc
ggaaccaacacctccaacttcgggtttggtaccaaccaagctggaggaggactctttggg
aacaagacggccactggtggactcggcgctgggcttggaaccggctttgggacagttggt
accggaaccactctgtttggaaacaaccagaacaaactgggcaccacgctgggaaccatg
ggagcgtttggaaccacgggcttcaacagcggaggaacgggtctgggcttcggggcacca
cagcagcccgttgcgctgaccgacccaaacgccaatgccgcccagcaggccatgctgcag
caacagctcaacgttctggcctactctccgtacggcgactcgccgctcttcaggaacccg
ctgtctgatccgaagaagaaggaggagcgtctgaagccgaccaatccaacggcccagaag
gctctgaccacgcccacccactacaagctcaccccccgacctgccaccaaggttcggccc
aaagcgctcacgtcctccggcgcctccaagtcacagctgtttgacggtctggatgacgac
gagccgtcactcaccaacggagctttcgtccccaggaagagcatcaagaagctggttctg
aagaacctgaacagcagtcagtacagcaacagcagcctgaacaaggagaacgatgacctg
gcctcgccatcggactacccccagaatggacacagccaagtagaggaggaggacattcgg
gaggttccaggtgtgagcaaccggaccgacgatgacccagaagtcacccagttctatgtg
aaccccatcgccaaacccatcccacagggccgggtccagagcagcctgcaggacaccatc
agtgacctgaacatgcacaagcagccgaggaacggcctggagctgagcagtgatgatgtg
tcagcgtccttcggggaggattctctgcaggaggaagaggaggaggaggagcagcagcag
gagcctaagcagtctcctcatcctgcaggcatcgttctgaacaaaatgggttactacacc
atcccctccctggacgatctggccgagatggtggatgaaaatggagagtgtgtggtggag
aacttcaccatcggcaggaaaggttatggctcgatcttcttccccggcgaggtgaacctg
actggactcaacctggatgagatcgtccacttcagacgcaaagaggtcatcgtctacccg
gacgacaagaacaagccgccggagggggaggggcttaacagacgggccgaggtgactctg
gatggcgtctggccaaacgataagacgacctgtgctcagatccgcagcccagagcgtctg
accgacatgaactacgaagggcggctggagaaggcctccaggaggcagggagcccgcttc
ctggagtaccggccagagaccggctcctgggtctttgaggtcacccatttctccaaatat
ggacttcaggactccgacgaagacgacgacgtcccgcctaaaactgaccccaagaagctg
aagacgatgatgtcactgcctgcctccaggctgcagcagctgcttcctccatctcagcag
caggtggcgccacaggctcagtccaccgctgtggatctggcgagcggcatggcggagctg
gacagcgacatggccgacatcacgcagagcgtcccgatggagagcatcctgggagccgaa
gacggcgagctgccgctggacgacacggagctgagcaagctggggggggaggttctggct
gaccatgagctgaccgggtccagccacatcccctcctctctgggcatcaacccgcacacc
ctgcagatcatgaaggcgtcgctcttcactgaggaagaggaagatgacatgttccagaac
agaaccaaaggatccacggacacctcgtctcctcgggtcatcctgtcgggacctctgggt
cgacctccagtcgggggcctccttcaggcccgtttcagtacctctcagcgtttggactcc
ccccggccgtctgcgctggccgaccctccacggcccatgcagtggaagagcccaggcccc
gcctccttcctgctgccgcccagagttccagaaccggcgattcgaacagtgggagtccgc
aggctgggcggcccggtccccctcaaagaatcggtcactcagggcaagggggcgctgttg
atggacacaggcctcttcgccacccgctcattcagggtgggctgggggcccggctggacc
ttggcccactgcggtagccggctcggctctcagaaccagcaccaagaggtcggctccaag
acggacttcagcttcatgcccaaaccatccaggaacaaaccgctcgctgagagccccttc
aaggtggttctggagcagctggtgggactggagcctctgcagaggaagaccagtgaggaa
gaggaggaggaggaggacagcaatgcagtgctgcaacgccccctggagatctgcctgaag
aacagcaccgtcagcatcccagagggaggcgcctgtcctctggtggagcctcagagcggc
gtggcggcgctgcacgagtacgccgagtggatcacggagctgagggagcggcgggacgac
gcagagcccgtcctggctcactgggccgaggtctggaccctgtgtgaggccctgtggggc
cgcctgggcccctcccatcaggaatcggaaccagaaccgctgggcgaatacgagcagcag
ctgcagaggcggcgcgccttctccgcctggctatcccacggcgcctcctgcagggtggag
aaggaggtggcgctggttgggaggagtcgtcacacagaggccgttttcagctatctgaca
ggaagccgcatcagcgaggcgtgtcgggtggcccagaaggaaggagaccaccggctggcg
ctgctgctctctcaggccgtcggctcccagttctgccgcgacctgctgggcctgcagctc
gccgactggaaccggatgcagacggaccactacatgacggaggacagacttcggatcttt
gtcctgctggccgggaaggctgtgtggcagtcgtcggagtcggcggtgaacgtttgctct
gagctcgactggaagcgctgcctggcgctgcacctgtggtacatgctgcctcccaccgcc
tccgtggccgacgccctcgctaaatatgaagccgcgttccagggctccactgaggctggc
cggtacgcctgtgcccccctgcccccctaccaggaggcggagctaccagatgaggaggag
gaggagtctgagcggccgctgtacgatctgtgtttccacctgctgaaactctacagtgac
agacactacagcctgcagccgctgctcgacccgctcaccgtcacctggcgacgcctggat
taccgcctcagctggcacctgtggggcgtcctgcaggcgctgaactacagccacctgagc
gtctgtaggcaaggcctggtccatgccagctacgctgcccagctggagagcgccggcctc
tggcacatggccgtcttcatcctgctgcacatcccagaccacagccagcgagagcgagcc
gtcagggagatgctgacgctacactgccccctactggagacggaggaatctgttcgcagg
gagcgcttcctgacggagcggctgctcatccccgagagctggatccacgaagccaaggcc
atccgggcccacagggacggagaccggcgccagcaggcgctgcacctgtaccgggccgga
tactggaaccagtgccaccggctgctgatccagcacctggcctcagactgcatcatcaac
gacgaccacgactacctgctggagttcctggaaggcctggcagtacctgaacacagcgcc
agcatccaggactgggacacggcagggagagtctacctagactacatccgagtcatcaag
tgtctgcaggacatccagcagatggagaacaccggatacgagctggagcgtctctatgcc
gacgtgacgtcgctctgcagccggatcgagctgctgccctgcaggacggccaaggaccgc
ctcgcccaatcagaaatggcgaagcgtgtggcgaacatactacgggtggtgttaagcctg
cagcagggtgacggtgctgccgacccgctcagcatcccactggcccagttggcgccgcac
atcagccgcctaccgatgccggaggactacaccctggaggagctgcggggcctgacgcag
tcgtacctgcggcagctggtcgtcagccaatga
DBGET
integrated database retrieval system
