Cyprinodon variegatus (sheepshead minnow): 107102890
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Entry
107102890 CDS
T06110
Symbol
lrrk2
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 2 isoform X1
KO
K08844
leucine-rich repeat kinase 2 [EC:
2.7.11.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cvg01001
]
107102890 (lrrk2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107102890 (lrrk2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107102890 (lrrk2)
Enzymes [BR:
cvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107102890 (lrrk2)
Protein kinases [BR:
cvg01001
]
Serine/threonine kinases: TKL group
LRRK family
107102890 (lrrk2)
Membrane trafficking [BR:
cvg04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
107102890 (lrrk2)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107102890 (lrrk2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
COR
Roc
Ras
Ank_2
Ank_4
TniB
AAA_22
Rad17
AAA_5
LRR_9
NACHT
ABC_tran
Viral_helicase1
G-alpha
Septin
Arf
AAA_16
AAA_7
MMR_HSR1
T2SSE
RsgA_GTPase
AAA_14
nSTAND3
DUF87
Motif
Other DBs
NCBI-GeneID:
107102890
NCBI-ProteinID:
XP_015257829
LinkDB
All DBs
Position
Unknown
AA seq
2535 aa
AA seq
DB search
MVDKEELEGRLRKLLVRLRSPREDRQLSTLIQILHDLLFLARADHAAELFKDKDLHLPLT
VVLSSYMSSKGVQQVGLSLLCKLIEICPNTLEELTRPLQASGEWEVLGLHQQILKVLSQH
IADPEVTVVGFRALALMLRSDPVPLLVLEEEEDVFSLVVQVMKTFPTNEELQFQGCKALQ
LLLDRVSDDHLLEFVENQDHHVVLAALQNFSDSPELLIQAIKVLLPLAGPASNVEVLMSG
GTRCYSIVISAMDAFPEVEELQEVACLLLRRFTSESFYNILVLNGVQRVCLRACQTFPDN
AALQAAALSCLADLTATIVQSKAVAEQGLEEGELEAERGMEEVEDMGLGWMEDCCTALEL
HAAEQAVQEAASWAIHNLLLNGAQVNPSEEELEGRTPVHRRLMAAMLLHPSSPSVFIAAT
SAIATLITNNSKMSSLLLSGGLHVNLVEMMRRHASSADVSISACKLLKLLFYGRTASLDE
LNMAMSQILTTMKVHNFHSEVQLAALEASLIFLCPDRSLRENGASVADPDMADVSLRVLK
NQCVLEGAHTLYLEVLNRFIRRPILQQCGLKVLSSLADCSGAVDLLCQQGAIDTVLHTLQ
MFPKEREIHYWGLTLLSYLVVKKKLSRMMVPILASVVVASLSQYRNDSEMVLKCFQVALR
MLDACSGAAAELQRENFDRQIFQHLRQDSEQTVSPLRKTACLALSKMWCDSELHYSMLEK
ACMDGDTMMAECLIELGADINKKTKNESLVYQVCEKGGPLELVELLVSRGAPEQSLRRAL
AVSVKRGDGPIVILLLGRLGLDLNNSALCLGGFRLGRLDAAWLSPLLADRSRANSLRYNS
KGVSLARYIQSLQRSKGIVAFSRLMSDQCLTSGYISDESDDSSFSAVSMDDSLFMNDDIE
SDGSDSLLGALSPKSKNSSAEELRGDSFKKKQGRHRHPSSESPQAESENGEPIHRRFVRT
NSKSVLYGENSAALPKEKERIRLLDLSGNELGSLSCLQDDAFVQQQLWHVIRLDLSNNGL
PEFPSAICQSLSSLTRLDLQGNQLQSLPDGLLALPSLRMLNVSRNLIGPVLSFHPAVTCP
SLRQLNLSFNKITTFPYELGQTMEKLEELFMEGNSLTDLCSAVNLPELKLLDVSKNNVEN
ISPEFLTGCPKLETLNASMNKICSLSLLPSKLMTLKLANNNFNHIPEAILHLPNLRSVDM
RTNSIAVLPGPGCWASRNIRELMFSQNCIKGLDLSGPIYRWARLEKLHLSDNKLSEIPPQ
IGMIEGLTSLDVSRNSNLRSFPNEMGKLGRLWDLPLDGLRLELDLKVLGNKTKDVVRFLQ
QRLKKAVPYHRMKLIVVGNTGCGKSTLVRQLIKLKRCQQNSKQSAVDVFDWTIKERDKKK
MLLNVWDFSGGAELTGSHPLFLTSRALYLVVYNLSKGASQVDALKPWLFNIKAVAPLSPV
ILIGTHTDVSEELQLQSCLSKIRAELLNHQSFPAIRDYHMVSLCEDSDSIVRLRKAIIRE
VTSFKIQGQQIMGQLVPDSYVELERRILQERTKVPPEFPVLKHDKLLQLIQESQLQLEEA
ELPHAVHFLSEVGILLHFDDPALQLRELYFLDPQWLCNILSQKLTLKSCGLLEQPKGVVQ
RSVVERFLLETKCFPKSHMVQFFKLLEKFQIALPFGEDQLLVPSSLSKHRPVIELPHCEN
SEVIIRLYEMPYFPMDFWSRQISRLLEVSSYLLCGREKVLRPNRIYWRQGIYLNWSSEAY
CLMEAASEEQNPSSFVRITVPSSRKGRVLLGQVVDHVDSVLEEWFPGLLNTDMHGNGETL
LKKWALYSFEDGQEWSKILLEDLCNHFDKDFLLVNPEDPRCLIPISQIAPDLVLDDQLAG
TLLDSEELEVDLSLENRLGDGGFGTVYRGVYKNEEVALKIFNKHASELYVHRLLRQELAV
LGRLRHPSLVGLLAASSAPRVLVMELALRGSLDSFFGHEKSSLNRKLQHRIALHVADGLR
YLHSAMIIYRDLKPHNVLLFNLKSDSDIIAKITDYGIAQYCCSMGVRSSEGTPGFRAPEV
ARGNVIYNQQADVFSFGLLLYDLLTSGERISDGMKFPSEFDETAVQGKLPDPVKHYGCSP
WPSFQALMTDCLKESPQDRPTSAQVFDRLNSGEMLCLMSEVKVSSMFGAQCITMSYSRCS
SSHQRTSNPVAWLGGGSSYHKRGLVTAVDLQTNTVTSQEVDTSPVLCLATVQIPNEECDW
LVAGTQSGSLLVISTKDVSSWHHLQSVSDAVTSLYFHVHPRRTQRQNYLLVGTADGVLSV
YTESALMQEDGQPVKTLMVGSVSTPLLCLGQSTHSLDSRTVWAGCGTKILAFSVDYDVCK
AIDTRPNLIFHQQRSLSSEASVSRMVVDKHVYLSKAGTQTVEVWDKRSERMVDCIDCAQI
IRRDSGCRVEPSAEVSPTWATVKALMMQNTAALWIGTRGGYLLLLELSKHQTLQVLAPLC
DSVRSIASAFIQSLNWKNAVLVLGRRLPRDKNHDDEESVLMVWNSMLPLEVKDLKKHCEK
RERAAARMREQLHHT
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atggttgacaaagaagaactagaggggaggctgaggaagctgctggtgaggctgaggagc
ccacgggaggacaggcagctgtccacgctcatccaaatcctccacgatctgcttttcctc
gcgcgcgcggaccatgcggctgagctgtttaaagacaaagaccttcaccttccccttact
gtggtactttcatcttatatgagcagcaaaggagtccagcaggtgggcttgtcgttgctt
tgcaagctcattgaaatatgcccaaacacactggaggagcttaccagacccctgcaggcc
agcggggagtgggaggtactgggactgcaccagcagatcctgaaggtcctttctcagcat
attgccgaccctgaagtgaccgtggttggatttagagccctggcactaatgctcagatcg
gatccagttcctctgctggttcttgaagaagaggaggatgtgttcagtctggttgtgcag
gtgatgaagacgtttcctaccaatgaggagctccagttccaaggttgcaaagctctgcag
ctgttgctggacagagtgagtgatgatcatctactggagtttgtggaaaaccaggaccac
catgtggttcttgcagctctgcagaacttctctgacagccctgagcttctcatacaggcc
atcaaagtgttgctccctctggctggcccagccagtaacgtggaggtgttgatgtcagga
ggcactcggtgttacagcatagtcatctctgccatggatgccttccctgaggtggaggag
ctgcaggaggtggcctgcctgctgttgaggaggttcacttcagagagtttctacaacatc
ctggtgctgaacggagtccagagagtctgtctgagagcatgtcagacgtttcccgataac
gctgccctgcaagccgctgcactctcctgcctggctgacttgactgcaaccatcgtgcag
agcaaggcggtggctgagcagggtctggaggaaggagagctggaagcagagagaggcatg
gaggaggtggaggacatgggcctgggctggatggaagactgctgcaccgcgctggagctc
catgcagctgagcaggctgttcaggaagcagcaagctgggccattcataatctgctgttg
aacggagctcaagtaaacccttcagaagaggagctagagggcaggactcctgttcacagg
cggttaatggctgcaatgctgctgcacccgtcctctcccagtgtgttcatcgcagccacc
agcgccatcgccacgctcattacaaacaacagtaaaatgagctccttgttgctgtctgga
ggcctccatgttaatctggtggagatgatgaggagacacgcaagttcagcagatgtttcc
atcagcgcatgcaagttgttaaagctgcttttctatggaaggaccgccagcctggatgag
ctgaacatggccatgagccagatcctcacaaccatgaaggtccataacttccattcagag
gtccagctggcagctctggaggccagtctgatcttcctttgcccagacaggagtttaagg
gagaacggggcgtctgttgcagatcctgacatggccgatgtgtcgctcagagtcctgaag
aaccagtgtgtgttggagggagctcacacactctacctggaggtcctcaacaggtttatc
aggagacccatcctgcagcagtgtggcctgaaggtgctgtcatccctggctgactgctcg
ggtgcagtggatctgttgtgccagcagggggcgatagacacagtgctccatacactacag
atgttcccaaaggagcgagagatacactactggggtctaaccctgcttagctacctggtg
gtgaagaagaagctgtcgaggatgatggtgccgatcctggcatctgttgtggtagcctcc
ctcagtcagtacagaaacgattcagagatggtgttgaagtgttttcaggtggcgctgagg
atgttggacgcctgctcaggggcagcagctgaactgcaaagggaaaacttcgacagacag
atcttccaacacctcaggcaggatagtgagcagaccgtcagcccactgcggaaaacggcg
tgtctcgctttgtccaagatgtggtgcgactctgagctacactacagcatgctggaaaag
gcctgcatggatggcgacaccatgatggcagagtgcctcattgagctgggcgctgacatc
aacaagaagacaaaaaatgagtcgctcgtttatcaggtgtgtgagaaaggtggtcctctg
gagctggtggaactcctggtgagcagaggcgctcctgagcagtccctccgcagggctctg
gctgtgagcgtgaagaggggcgatgggccaattgttatcctgctgctcggccggctcggt
ctggacctcaacaacagcgccctctgcctcggaggcttcaggctcggccgactggatgcg
gcctggctgagtcctctgctggctgatcggagcagggccaacagtctgcgttacaacagt
aaaggtgtaagcttggcgaggtacattcagtctctgcagaggtcaaagggcatcgttgct
ttttccagactgatgtcagaccagtgtctgacttctggttacatatcagatgaaagcgac
gactccagcttcagcgccgtgtctatggatgacagcttgttcatgaacgacgatatagag
agtgacggaagtgattcattgctgggggctctctctccaaagtccaaaaacagctcagca
gaggagcttaggggagactccttcaaaaagaagcagggacgccacagacaccccagctca
gagagtcctcaagctgaaagtgaaaacggtgaacctatacacagaagatttgtacggact
aactctaagtcagtgttgtatggcgagaactctgctgctctgcccaaagaaaaggagaga
attcgcctcctggatttgtccgggaacgagttgggctctctgtcctgtctccaggacgat
gcttttgtccaacagcagctgtggcacgtcattcgtttggacctgagcaacaacggtctg
ccggagttcccgtctgccatctgccagagtttaagcagcctgacccgactggacctgcag
ggtaaccagcttcagtcgttgccagacggcctgctggcgctgccctcactgagaatgctc
aatgtctcccgtaacctcatcggtcctgtgctgagcttccatcctgctgtcacctgcccc
tcactgaggcagctcaatctgtcgttcaataaaatcaccacattcccctacgagctgggc
cagactatggaaaagctggaggagctgttcatggagggtaacagtttaactgacctgtgc
tctgctgtaaatctcccggagttgaagctgctggatgtgagcaagaataacgttgagaat
atttctcctgagttcctgaccggctgccccaagctggaaaccttgaatgcttcaatgaac
aaaatctgttccctttcactgctgccttccaagttgatgacattgaagctggcaaacaac
aacttcaatcacattcctgaggccatactccatctaccaaacttacgttcagtggacatg
aggaccaacagcattgctgttctgcccggcccgggatgctgggcgtcccgtaatatcaga
gagctgatgttcagtcagaactgcatcaaaggcctggatctgagtggaccaatctacaga
tgggcaagactggagaaacttcatctgagtgacaacaagctgagtgagatcccgccacag
atcggcatgatagaaggactgacgtctctggatgtgagtcgtaactccaacctcaggtcc
ttcccgaatgagatggggaagctgggcagactgtgggacctgccactggacggccttcga
ctggagctggacctgaaagttcttggcaacaagaccaaagatgtagtcaggttcctgcag
cagcggctaaagaaggcagtgccgtaccaccgcatgaaactcattgtagttgggaacacc
ggctgtgggaagagcaccctcgtcaggcagctgattaagctgaaacgctgtcagcagaac
tcaaaacagagtgctgtcgacgtttttgactggaccatcaaggaacgggacaagaagaaa
atgttgctgaatgtctgggacttctcaggtggagcggagctgactggctctcatcctctc
tttttgacatccagagctctctacttggttgtttacaacctcagtaaaggagccagtcag
gtggatgctctcaaaccatggctcttcaacattaaagcagtggctccactttctccagtc
atcctcattggaactcacactgatgtgagtgaggagctgcagcttcagtcctgcctaagt
aaaatcagagcggagctgcttaaccatcagagcttcccggccatcagagattatcacatg
gtctcactttgtgaggattctgactccattgtcagacttcgcaaagcaatcatcagagag
gtcaccagcttcaagatccagggccagcagattatgggtcagttggtgccggacagttat
gtagagctggaacgcagaatcctccaggaaaggaccaaagtcccaccagagtttcctgtc
ctcaagcacgataagcttctgcagcttatccaggaaagtcagctgcagctggaggaagct
gagctgcctcacgccgttcatttcctcagtgaagttggcattttattgcattttgacgac
cctgcgcttcaacttcgagaactttattttcttgaccctcaatggttgtgtaacattcta
tctcagaaactgacattaaagagctgtggcctcttggagcaaccaaaaggagtggttcaa
cgttctgttgtggaaagatttctgttggagaccaaatgtttcccaaagagccacatggtc
cagttctttaaacttttggagaagtttcagattgcccttccgtttggtgaggaccagctg
ttggtacccagcagtttgtccaaacacagaccagttatagagctaccacactgtgagaac
tctgaggtcattatacgtctgtatgagatgccgtacttccccatggatttttggtcccgg
cagataagtcgccttttagaggtttcttcgtatttgctctgtggaagagaaaaggtgctt
cgacccaacaggatttactggaggcaaggtatttaccttaactggtcgtctgaagcttac
tgtctcatggaagccgcctcagaagagcagaatccatccagctttgtcaggataaccgtg
ccttcatctcgaaaaggccgggttttactgggccaagtggtggaccatgtcgactctgta
ctagaggagtggtttccaggtctgctcaacaccgacatgcatggcaatggagaaacattg
ctgaagaaatgggctctctatagttttgaagatggccaggagtggagcaagattctgcta
gaagacctctgtaatcattttgataaagattttttactggtgaacccagaggatcctcgc
tgcttgattccgatctctcagattgccccggacctggtactggatgatcaacttgcagga
acattactggacagtgaggaattggaagtggacctctccttggagaacagactaggggat
ggaggttttggaacagtttatcgcggagtttataaaaatgaagaggtggctttgaagatt
ttcaacaaacatgcttctgagctttacgtccacagactactcagacaggagctggcagtc
ctgggccgtctccgtcaccccagcctggtggggctgctggccgcaagctctgctcctcgg
gtcctggtgatggagctggctctcagaggctctctagactccttctttggccatgagaaa
agtagcctcaaccgaaaactgcagcacaggatcgccctgcatgtggcagatggactaagg
tacctccattccgccatgatcatataccgagatctgaaaccccacaacgtgctcctgttc
aacctgaaaagcgactccgacatcatcgccaaaatcacagactacggaatcgctcagtac
tgctgcagcatgggagtgaggagctccgagggaactccaggtttccgagctcctgaggtg
gcccgaggtaacgtcatctacaaccagcaggctgatgtgttctcgttcggcctgctgctc
tacgacctgctgacgagtggcgaacgcatttcagacgggatgaagttccccagtgagttt
gatgaaacggcagtgcagggaaagctgccagatccggtaaagcactacggctgctcacct
tggccaagcttccaggctctgatgacagattgtctgaaggaaagcccacaggatcgtccc
acttctgctcaggtgttcgacaggctgaattcaggggaaatgctttgcttgatgagtgaa
gtgaaggtttccagcatgttcggtgctcagtgcatcactatgagctacagccgctgcagc
agcagccaccagaggacgtcaaaccccgtggcctggctcggcggaggcagcagctatcac
aagaggggcttggtcacagcagtggacctgcagaccaatacggtcacctcacaggaggtc
gacaccagccccgtcctttgcctagcaacagtccaaatcccaaacgaggaatgtgattgg
ctcgtagcaggaacacagtctggctccctactggtcatcagcactaaggacgtgtcctct
tggcaccacctgcagagcgttagcgacgccgtcacctcactctacttccacgtacatccg
cggcgcacccaaagacagaactacttgctggtcgggaccgcagacggagttcttagtgtt
tatactgagtctgcgctcatgcaggaggacggtcagcctgttaaaactctgatggttgga
agcgtcagcactcctctgctctgcctgggccagtccactcactcgctggacagcaggacc
gtgtgggccggctgcgggaccaagatcctcgctttctccgtcgactacgacgtctgcaag
gccatcgacacgaggccaaacctcatcttccaccagcagcggtctctgagcagcgaggcg
tccgtctcccgcatggttgtggacaaacacgtgtatctcagcaaagctgggactcagact
gtcgaggtgtgggataaaaggagtgagaggatggtggattgcatcgactgcgctcagatc
atcaggcgtgattctggctgcagagtggagccgtccgccgaggtttcccccacctgggcc
acggtgaaggccctgatgatgcagaacactgcagctctctggatcggcactagagggggc
tacctgctcctgctggagctctccaagcatcagacgctgcaggtgttggcgccattgtgt
gattccgttcgctccatcgcctctgctttcatacagtcgttaaactggaagaacgctgtg
ctggttttgggtcggaggctcccacgagacaagaaccatgacgatgaggagtcggtgctg
atggtgtggaacagcatgttgcctctggaggtcaaagacctgaaaaagcactgtgagaag
agagagcgagccgcagccagaatgagggagcagctccatcacacctga
DBGET
integrated database retrieval system
