Cyprinodon variegatus (sheepshead minnow): 107102913
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Entry
107102913 CDS
T06110
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04260
Cardiac muscle contraction
cvg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107102913
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107102913
04261 Adrenergic signaling in cardiomyocytes
107102913
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107102913
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107102913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
VWA_CoxE
dCache_2
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
107102913
NCBI-ProteinID:
XP_015257858
Ensembl:
ENSCVAG00000014753
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MAKEKRSRSVSCLISVEILLIFCASWPGAEGLTFPQQYTIMHWARRIEQEIDRVFQHITG
AQQLKGIYNEERRQFSLVKNQPRRIVEKVALDIEKLLAKKRKALDRLASEAERLQREHIW
QDGLKELDMAYYDSKADLEYYSMDGEAEVENPSQLKLEFVYDPNFKNNVNFSHTAVQIPT
DIYKGAPDILNELNWTQALERVFMENSREDPSLLWQAFGSATGVTRYYPATPWKAPDKID
LYDVRRRPWYIQGASSPKDMVILVDVSGSVSGLTLKLIKASVMEMLDTLSDDDYVNVARF
NEKAEAVVPCFKHLVQANVRNKKIFKEAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPRA
NCNKIIMLFTDGGEDRAQDVFLQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYYF
EIRSICAIRINTQEYLDVLGRPMVLAGSVAKQVQWTNVYQDALGLGLVVTGTLPVFNLTM
NGNSQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIFAIDPNGYLLLHPNLQPKPVNLP
EPVTLDFLDAEVEDANKEEIRRQMIDGGTGEMQIKTLIKSVDKQYIDEAYRGYTWTPING
TDYSLGLVLPPYNEYYIQADLSDVMLQLQYMQSLLPSSFESSGHVFLAPREYCKNLQLSD
NNTQFLQNFLTLMLENSPESDECDQGLIHNLILDSRIIGQLASRVWRNKDLNAYGFLAVF
ASTDGGITRVFPNIAAELWDVDPEPFNSDYYRRSLDNKGYMFRPSMRASDDDPFEAENGT
TGILVSSAVEVNLGGKLLKPSVVGVKLDLEAWVDKFKILASNVSDNRQGSHKCGPSRSCE
MDCEVNTDDLQCYLIDDGGFLVMSNQRDHWKQIGRFFGDVDPFLMYALYNNSIFARRQSF
QYQSACEMVSRSHTGAAARSIYVPSITDVLSLAWWTSTLAWSVIQQLLYGLVYSSWLYHD
DAFVDGFETKQSSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHSKRIENTNLLFVVAET
LPCSSCEIERLSQIKREFQEENPCDLLSNARYRKGPTSCFDYSALENTSECGRGSSLQSS
IGTLLFIQLILPLFHLSHIHTH
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaaaaaagatctcgcagcgtctcttgcttaatatcagtagaaattctcctg
attttctgcgcttcgtggcctggagcagagggtcttacatttccacagcaatacacgata
atgcactgggccaggaggatcgagcaggagattgacagagtctttcagcacatcactggg
gctcagcagctaaaagggatatataatgaagaaaggcgacagttcagtctggtgaagaat
caacctcgaaggattgtggaaaaggtggctttggatatagaaaaactgctggcaaagaag
cgcaaagcactcgatcgtttagcgagtgaagcagaacgactccaacgggaacatatatgg
caagatggactcaaggagcttgacatggcctactatgactccaaagctgatttggaatat
tattccatggatggagaggcagaggtggaaaacccctcccaactcaagcttgagtttgtg
tatgatccaaacttcaaaaataatgtcaacttctcgcacacagcagttcagattccaaca
gatatttacaaaggagctccagacatcctgaatgagctgaactggactcaggccctggag
agagtctttatggagaacagcagggaagatccgtcactactgtggcaggcgtttgggagc
gcaacgggagtcactcgctactatccagctactccctggaaagcacctgataaaatcgac
ttgtatgatgtccggagaagaccatggtacatccaaggtgcctcatctcccaaagacatg
gtcatccttgttgatgtgagtggcagcgtcagtggactaacgctgaagctgatcaaggcg
tctgtgatggaaatgctggacactttatctgatgacgactacgttaatgtagccaggttt
aatgagaaggctgaggctgtggtcccttgctttaaacatctcgtccaggctaacgtgcga
aacaaaaagatttttaaggaggcggtgcagcagatgcaggctaaaggcaccactgactac
aagtctggctttcattttgccttcaaccagcttcttaataagacaaatgttccgcgggct
aactgcaataaaataattatgctattcactgatggaggggaggatagagctcaggatgtc
ttcctgcaatacaattggcccaacaaaacagtacgagtttttaccttttctgtgggtcaa
cataattatgatgtgacgcctttacagtggattgcttgtactaataaaggttactatttt
gagatccgttccatctgtgctatacggattaatacccaggaataccttgatgtgctgggg
cgtccaatggttctggcaggcagtgtggccaagcaagttcaatggaccaacgtgtatcaa
gatgctctgggacttggcctggtagtaacagggactttgcctgtttttaatctcactatg
aatggaaattcacagaatcagctgatattaggcgtcatgggagtggatgtacatttagat
gagataaagcgactgacgccacgctataatcttggagccaatggctacatttttgccatc
gatccgaatggatatttgctccttcatcctaatcttcagccaaagcctgttaaccttcct
gaacctgtgaccctggatttcctggatgcagaggtagaagacgctaataaagaggagatt
cggcggcagatgattgatggaggaacaggggagatgcagataaaaactctaattaagtct
gttgataaacaatacatcgatgaggcatacagagggtacacctggactcctatcaatggc
actgattatagccttggcctggtattacctccctacaatgagtattacatccaggcagac
ctgagtgatgtgatgctgcagctccagtacatgcagtcgttgctgccgagctcctttgaa
tcttcggggcatgttttcctggctccaagggaatattgcaaaaatctgcagctttctgat
aacaacacacagttcctgcagaacttcctcactcttatgctggagaactccccagagtct
gatgaatgtgaccaaggcctcatccacaaccttattctggactctaggattattggtcag
cttgcttctcgtgtttggaggaacaaggatctaaatgcgtatggcttcctggctgtcttt
gcatccacagatgggggaataacacgagtttttcccaacatagctgctgagttgtgggat
gtggatccagaaccatttaattcagattactacagacgaagcctggataacaaaggctac
atgttcagaccttcaatgagagcatcagatgatgacccttttgaagctgaaaatggcacc
acgggaatcctggttagctcagctgtcgaggtcaatttagggggaaaactgctcaaaccc
tctgtagttggagtgaagctcgacctggaggcgtgggtggacaagtttaaaatcctggcc
agcaatgtgtctgataaccgacaggggtcacacaagtgtggaccatccagaagctgtgag
atggactgtgaagtgaacacagacgacttgcaatgttaccttatcgatgatgggggcttc
cttgtcatgtccaatcagagagatcactggaagcagattggtcgcttcttcggtgatgtg
gaccctttccttatgtatgcactttacaacaactccatcttcgctcgccgacagtctttt
cagtaccagtcagcgtgtgaaatggttagcaggagtcacaccggagcagcggcaagaagc
atatatgtgccgtccataactgacgtcttaagcctggcatggtggacgtccacactggca
tggtcagtgattcagcaacttttgtatggacttgtctacagtagctggctctaccacgat
gatgcctttgttgatggatttgagaccaaacaaagcagctgtgttaccatccaaagccag
ttctacttcacaaacaccaccaactcctacaatgtcctgcaggactgcggaaactgctcg
cggctgttccactcaaagcgtatagaaaacaccaacctgctctttgtggtggctgagacg
ctgccctgtagctcctgtgagattgagagactgtcccagataaagagggagtttcaggag
gaaaatccatgtgacctactgagtaatgcacgatatcgtaaaggcccaacctcctgcttt
gactacagtgccttagaaaacacatcagagtgtggacggggttcttcactgcagtcctct
ataggaacccttcttttcattcagctcattctgcccctcttccatctctcacacatccac
acacactga
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