Cyprinodon variegatus (sheepshead minnow): 107102949
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Entry
107102949 CDS
T06110
Name
(RefSeq) proline-rich protein 36-like
KO
K19553
homeobox protein TGIF2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107102949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107102949
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
107102949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
107102949
NCBI-ProteinID:
XP_015257913
Ensembl:
ENSCVAG00000013638
UniProt:
A0A3Q2FVE7
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MKALKRALEDDPHPDQDHSSAMSDSDDGSPLDLSGRGNFGKRRRRGNLPKESVQILRSWL
YEHRFNAYPSEQEKLSLSNQTKLSVLQICNWFINARRRLLPDLLRKDGKDPTKFTISRKV
VSKSEGQQSTAGEASSPEIVASARSSQQRPSVIRSAPTLDLSLLGNTATAILTGAGYPGK
EGSVQALMKLDTQSLLREADERGIHSTVPANMAASHSSGLLNTPPPTPPELYPSHDFSDL
RLLVDAALQRAAEQDLLKETHSKPAEPLEAKLVDANEMGRTPPPEEKVMDPSRAQCLMEK
AMSVPESIKSPCTESSTAAVPVLAPVLLPASSMTPLPAKKGIWNPLDKDAVRTSSPNQPP
LIPARLPAIVPVSAVVLGRPELQKPAALPVMNPKLPPASTSVSPPASCPVTASSPAVGPV
SMEIPSSQSATSSDSPPFHKPPSIPVTAPTVLHASSSVSSAAPAVPPLLSLASHLTPHSA
AGSSSAIVPKVWSVVHANSRPAGSLQVVKTPISTVWGPQRNLHTLSEAVN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgttgaaacgagctctggaggatgacccccacccggatcaggaccattcctcg
gccatgtcggacagcgacgacggctccccgctcgacctgtcaggaaggggtaactttggg
aagcgccgtcgccgcggaaacctgccgaaagagtcggtgcagatcctgcgcagctggctg
tacgagcaccgcttcaacgcatacccatcggagcaggagaagctcagcctttccaaccag
actaagctctccgtgctgcagatctgcaactggttcatcaacgctcgtcgccgcctcctt
cctgaccttctccgaaaggatggaaaagaccccaccaagttcacaatctcgcgtaaggtg
gtcagtaaatctgagggccagcagtcgaccgcaggcgaagcaagctctcctgaaatcgtt
gcttcagctcgctcctctcaacagcgtccatccgtgatccgctctgcgcccactctggac
ctcagtctgctggggaacacggccacggccatcctcaccggagcgggctacccaggaaag
gaggggtctgtgcaggcgctcatgaagctggacacacagagcctgttgagggaagcggat
gaaaggggcatccattcgaccgttccggctaacatggctgccagccactccagtggtctc
ctcaacacgcctccacccacccctcctgagctctacccgagtcatgacttcagtgacctg
cggctgctggttgatgctgcgctgcagagagctgcagagcaggacctgctcaaggagacc
cacagcaaaccagcagagcctctggaagccaaactggtggatgcaaatgaaatgggccgc
accccccctccagaggaaaaggtcatggatccttccagagcgcagtgtctgatggagaaa
gctatgtccgtcccagagtcaatcaaatctccttgtactgagtcgtcaaccgccgctgtt
ccagttcttgctccagtcttgctccccgcctccagtatgacgcctctaccagcaaaaaaa
ggaatatggaaccccttagataaagacgctgtcagaacatccagcccaaaccagcctcct
ctcatcccagcccgtctcccagctatagtaccagtttctgctgttgtcctggggcgacca
gagctccagaaacctgctgccctcccagtcatgaacccaaagctgcctccagcttccaca
tccgtctcccctccagcctcatgtccagtgactgcatcaagtccagcggtaggcccggtc
tccatggaaataccttcctcccagtcagcaacctcctctgattccccgccgttccacaaa
cccccctccatccccgtcacggcccccaccgtgctgcacgcctcctcctcggtctcctcc
gcagcaccggccgtcccgcctctcctgagcctcgcctcccacctcacccctcactccgcc
gctggcagcagttcagccatagtgcccaaggtttggagcgtggttcacgccaacagcagg
ccggctggttccctccaggtggtaaagacccccatcagcacggtgtgggggccgcagcgc
aacctgcacacactgagcgaagctgtgaactag
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