Cyprinodon variegatus (sheepshead minnow): 107102993
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Entry
107102993 CDS
T06110
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107102993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107102993
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107102993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4_C
GED
COG3_N
Peptidase_U40
Motif
Other DBs
NCBI-GeneID:
107102993
NCBI-ProteinID:
XP_015257977
LinkDB
All DBs
Position
Unknown
AA seq
231 aa
AA seq
DB search
FKLGSVLLDPVKKPAEAVTEVLIHTLQRGNTLQEHNRKLMEENQRLIQEHQRIIEELKHY
AEGKEALEAELYSRFVLVLNEKKAKIRSLKEAVTTLQETRDSDGRKNKDSPKSDQKGGDD
GEDDEYGGSTDEEQKEEESTVASQVTSRDSDSPSPLNLRDITDVAPCRKRRFRHLGAPEV
ALKKTNPEKTQEKRKDSSAASSQLQVPHHRIDAKKGASTETSAAEDLFEDI
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
ttcaaactgggttctgtcttgctggatccagtcaaaaagccagctgaagcagtgacagag
gtgctgatccacactttgcagcgaggaaacacactacaggagcacaacaggaaactgatg
gaggagaaccagaggctgatacaagaacaccaacgcattattgaagagctcaaacactat
gctgaaggtaaagaggccctggaggcagaactgtactctcggtttgtcctggtcctcaat
gagaagaaagcaaagatccgcagtctgaaagaagccgtcacaaccctgcaggaaacaaga
gattctgatggacggaagaacaaggattctccaaagtctgatcaaaaagggggtgatgac
ggtgaggatgatgagtatggaggtagcaccgacgaagagcaaaaggaagaggagtcaaca
gtagcatctcaggtgacatcgagagattctgattctcccagcccgttgaatctccgtgac
atcacggatgttgctccctgtcgcaagcgccggttccgccatcttggtgccccagaggtt
gctttgaaaaaaacaaaccccgaaaagacgcaggagaaaaggaaagactcttctgcagca
tcaagtcaactgcaggttccccaccaccgtatagatgctaaaaaaggagcttcaactgaa
acgtctgcagcagaagacctgtttgaggatatctga
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