KEGG   Cyprinodon variegatus (sheepshead minnow): 107103018
Entry
107103018         CDS       T06110                                 
Symbol
chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B isoform X1
  KO
K10751  chromatin assembly factor 1 subunit B
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cvg03036]
    107103018 (chaf1b)
Chromosome and associated proteins [BR:cvg03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     107103018 (chaf1b)
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta ANAPC4_WD40 EIF3I WDR55 Beta-prop_Aladin Beta-prop_WDR3_2nd CAF-1_p60_C Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st B-prop_COPA_B_2nd NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_EML Tricorn_2nd eIF2A WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_DCAF12 Ge1_WD40 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 107103018
NCBI-ProteinID: XP_015258010
Ensembl: ENSCVAG00000010778
LinkDB
Position
Unknown
AA seq 615 aa
MKVVTCEIAWHNKEPVYSLDFQHSTEGRFHRLATAGVDTTVRLWRVEQGPDGKAVVEFLS
NLARHTKAVNVVRFSPNGELLASGGDDAAILLWKLNDSKEPEQAAVFQDEEDSQLNKESW
SVVKTLRGHIEDVYDICWTRDGNFMISGSVDNTAIMWDINKGQKLSILNDHKSYVQGVTW
DPQGQYVATLSCDRVMRVYSTHTKKKAFCISKMSSGPLADGEVKQYRMFHDDSMRSFFRR
LSFTPDGSFLLAPAGCVEVGESIINTTYIFSRKSLKRPVAHLPCPTKATLAVRCCPVYFE
LRTKKGEDGSPLPLPNLFQLPYRMVFAVASEDSIFLYDTQQSLPFGLVSNIHYHTLSDLT
WSSDGSFLAVSSTDGYCSFLSFSPGELGTPLKEPPTLEVFVPNGGVEKKGKKSSAGKNSS
PVSQSSSSALNPTSQTSSVKKDSPCPTPLEEKRSTPKTKPGPQPRRITLNTLEGWGKPTT
PKDSTSSQSQTPTSGRTSAPSTPQPSVTPLTPTNSAKNSPRTAPLTPSTSKVLNTAESTT
PKGPPTPKGPTPRRVSLTPVGSRSPAVSLMFSNTSSAQKAKHERPSPPSDPVCQPPESKR
PKTGNTPVRTSVTKD
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgaaggtggtgacgtgtgagatcgcctggcacaacaaggagcctgtgtacagtctggat
ttccagcacagcacagagggacgtttccatcgactggccacagctggggtggacaccaca
gtcagactgtggcgggtggaacaaggtccagacgggaaggctgtggtggagtttttgtct
aacttggcccggcataccaaggcggtcaatgtggttcgctttagccccaatggagagctg
ctcgcttcagggggagatgatgcagctattcttttatggaagcttaatgactccaaagag
ccggagcaggcggctgtgtttcaggacgaagaggattctcagctcaacaaagagagctgg
tctgtggtcaaaacactcagagggcatatagaagacgtgtacgacatctgctggacacgt
gatggaaacttcatgatttctggatctgttgacaacactgctataatgtgggacatcaac
aaaggtcagaagttgtctatcttgaatgaccacaagagctacgtgcagggagtgacctgg
gatcctcaggggcagtatgtcgccaccctcagctgtgacagagtgatgcgtgtttacagc
acgcacaccaagaagaaggctttctgtatcagcaaaatgagctctggacctcttgctgat
ggagaggtgaagcagtaccgaatgtttcatgatgacagcatgaggtccttctttcgccgc
ctttcattcacacctgatgggtctttccttcttgctccagccggatgtgtcgaagtggga
gaatccatcataaataccacctacatcttctccaggaaaagccttaaaaggcctgttgct
cacctgccctgtccaactaaagccaccctggctgtgcgctgctgccccgtctactttgaa
ctcagaaccaaaaagggagaagatggctctcccctgcctcttcccaacctatttcagctg
ccgtaccgtatggtgtttgcggtggcctcagaggactccatcttcctttacgacactcag
cagagcctcccctttggcctggtgtccaacatccactaccatactctcagcgacctcaca
tggtccagcgatggctccttcctggccgtgtcatcaacagacggctactgctccttcctg
tccttctctcctggggagctgggcacgccgctgaaagagccccccaccctggaggtcttt
gtcccaaacggtggtgttgagaagaaaggaaagaagtcatctgcaggcaaaaactcctct
cctgtttcccagtcatcaagctctgctctgaatcccacatcccaaaccagcagtgttaaa
aaagactcgccgtgccccacccctctggaggaaaagaggagtacccctaaaaccaaacct
ggaccgcagcctcgcaggatcacccttaacacactggagggctgggggaagcccaccacc
ccgaaagactccacttcttcacagagtcagactccgacatctggaaggacgagcgcaccc
tcgactcctcagcccagcgttacgcccctcacccccaccaactccgctaaaaacagcccc
cgcaccgcacccctcactccgtctacatccaaggttctcaatactgctgaatccacaacc
ccaaaaggtccccccaccccaaaaggacccaccccaaggagggtgtctctgactcctgtt
ggatctcgttctccagctgtcagcttgatgttcagcaatacttcatctgctcagaaggcc
aaacacgagcgaccttctcctccctctgatccagtgtgccaacctccagaatccaaacgg
cccaagaccggtaacaccccagtaagaaccagcgtcactaaagattag

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