Cyprinodon variegatus (sheepshead minnow): 107103049
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Entry
107103049 CDS
T06110
Symbol
ttf1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107103049 (ttf1)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
107103049 (ttf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
107103049
NCBI-ProteinID:
XP_015258050
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MKRNYENLEEHPAVSMRDAPDGSKKKKKKSWDCDDGLPWRESASQTGAAGSDGLIPPQSI
KEEDQEVSLLQSKKKKKKKKKRCLDKEEAVDLIEHHRKKEKKGKMEEVPAAADLSSPKKK
KKEKMEEERLSLPPSDGSAHQKKRRRMEEMTSQEEDGDQVCEVMVSTDPNREEAAEEANV
SSTRLKKKKKRATKEKQEKKEQQGGYKKKGEEEEEINWDLVKELQEFSACLFACLSVLCL
SLCSLPVSLFSACLPVLRLSLCSPPVSLFSACLRPASGIPRPCHQVYIRALKLFDEKNNM
GMFSEEEVNNLIRFHNLHGNNWKLIAELMDRSIHSLQKRFDTIGGSHGAWSADEEKRLKR
AVQQYLETQSNTDGSGVTRDQLYKQLPWREISKKVQTRSWVQCRHKWLFILEHRMNIYRN
AFNRGAESYSAKIRLINTLYHSAVEDAADINWEEIAETVGTMSPWGIQRIFTRLKVRKVP
HFQSLSFGEIMDFLYHHLVPVLQEKLSSCRKKEQLQEQQQQDRYQLSDIFNSDVEDEDNS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaactatgagaacctggaagaacatccagctgtcagcatgcgagacgcacct
gatggcagtaagaagaagaagaagaagagctgggactgtgatgatggactgccttggagg
gagtcagcaagtcagacgggagcagccggctctgatggcctcatccctcctcagagcatt
aaagaggaggaccaagaggttagcctgctgcaaagcaagaagaagaagaagaagaagaaa
aaaaggtgcttagataaagaggaggctgttgacctgatagaacatcacaggaagaaggag
aaaaaaggtaagatggaggaagttcctgcagctgctgacctcagcagtccaaagaagaag
aagaaagaaaaaatggaagaagaaaggttgagccttcctccctctgatggatcagcacat
caaaagaagagaagaagaatggaggagatgacatcacaggaggaagatggtgaccaggtg
tgtgaagttatggtttccactgacccaaacagagaggaagctgcagaagaagcaaacgtc
agcagcacaaggttgaagaagaagaagaaaagagcaaccaaagaaaaacaggagaagaaa
gagcaacagggtggatacaagaaaaaaggcgaagaagaagaagagataaactgggatctg
gtgaaggagctgcaggagttctccgcctgtctcttcgcctgtctctctgttctctgcctg
tctctctgttctctgcctgtctctctgttctccgcctgtctccctgttctccgcctgtct
ctctgttctccgcctgtctctctgttctccgcctgtctccgaccagccagtggaatccct
cgcccctgccaccaggtttacattcgggccttgaagctgtttgatgagaagaacaacatg
ggaatgttctcagaggaggaggtgaacaatctcattaggttccataatctccacgggaac
aactggaagctgattgcagagctgatggaccgcagcatccattcgctgcagaaacgcttc
gacacaatcggtggcagtcatggtgcctggagtgctgatgaagagaagcggctgaagcgg
gccgtccagcagtacctggagacccagagtaacaccgatggttccggtgtgacccgagac
cagctttacaaacaacttccatggagagaaatcagcaagaaggtccagactcggtcctgg
gttcagtgtcgccacaaatggctcttcattctggagcaccgcatgaacatttacagaaac
gccttcaacagaggagctgaaagttactcggccaaaatccgcctcattaacacgttgtac
cacagtgctgtggaggatgcagctgacatcaactgggaggagattgctgagaccgtaggt
acgatgagtccatggggcatccagcggatcttcaccaggctgaaagtacgaaaagttcca
catttccaatctttgtcatttggggagatcatggacttcctgtaccaccacctggttccg
gttctgcaggagaagctgagctcctgcagaaaaaaggagcagctacaggagcagcagcag
caggaccgataccagctgtcagacatctttaactctgacgttgaagacgaggacaacagc
tga
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