Cyprinodon variegatus (sheepshead minnow): 107103087
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Entry
107103087 CDS
T06110
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107103087
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107103087
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107103087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107103087
NCBI-ProteinID:
XP_015258092
Ensembl:
ENSCVAG00000009389
UniProt:
A0A3Q2CQE5
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSSSYSVSLIGPAPWGFRLQGGKDFCLPLTISRLTDGGKAVKAGMNIGDIILSINGISSE
GMNHLEAQNKIKACTGNLSLTLQRPSTVSKEESVKEEPQEIIKPVPITHPAPSNTYTKPL
SQSTPLYNKTARPFGGGGSGFTTSSSPSAPKVATIPSESSAFTPAAPSQPPQPPFALKSS
HSASDSAAVNSSLKINPGRSAFTSPSASSTSSNSSSSPRVTAPPSNPNVPQPSVYNTPIN
LYSNDNACEVAIGQRRGLLESQGLSEHVNGKVGVELEKSASPLSEASKKRLIEDTEDWHP
RSGTSQSRSFRILAQMTGTENENIPENGKKEAVDRTTPIVHTSPAAKTHSYSTTAPRNGS
AITGSTFKTPSIQNKASFQPGGPSGFPKIGAGPSFGKIVGPAQKGPDLPTPQPHPEDLNS
LVQRAEHIPAGTRTPMCCKCNKVIRGPFLVAMGMSWHPEEFNCTHCHSSLAERGFVEEKN
QVYCVHCYEQFFAPTCASCNQKILGEVMNALKQTWHVSCFVCAACHQPIRGNTFHMEDGQ
PYCERDYYTLFGTNCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCSTSLEGQPFFSKKD
KPLCKKHAHSVNI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagtgtttccctgatcggtccagccccgtggggctttaggctgcaa
ggaggaaaggacttctgcttgcctcttaccatctctcggctgactgatggcggcaaggca
gttaaagctgggatgaacatcggagatatcatactttctatcaacggtatttcttcagag
ggtatgaatcaccttgaagctcagaacaagattaaggcttgcacaggcaacctcagcctc
actctacaaagaccctccactgtctccaaagaggaatctgtaaaggaagagcctcaggaa
atcattaagcccgtgccgatcactcaccccgcgcccagcaacacatacaccaagccactg
agccagtccactcctctgtacaacaagacagctcggccatttggggggggaggcagtggg
ttcacaacttcttcatccccctctgcaccaaaagttgccactattccctccgagtcatca
gctttcacgccagctgccccctctcaaccgccacagcctccattcgcactgaagtcgagc
cactctgcttctgattcggctgcagtaaactcgtctcttaaaatcaaccccggccgctct
gcattcacctccccgtctgcttcgtccacctcatctaactcctcatcatcacccagagtg
accgcccctccctccaatcctaatgtccctcagccctccgtctataacacacctatcaac
ctgtactccaatgacaatgcttgtgaagtggctattggacagaggcgaggccttttggag
agccagggcctttcagaacatgtcaatgggaaagttggtgtggagcttgaaaagagcgcg
tcccctctcagcgaagccagcaagaaacgtctgattgaagacacagaggactggcaccca
cggtccggtacctctcagtctcgctccttccgtatcctcgcacagatgaccggcacagag
aacgaaaacattccggaaaatggaaaaaaagaagcagttgatagaaccactcccattgtt
cacacatcacctgctgcaaaaactcactcatattctacaacagcaccccggaatggcagt
gctatcactggttctacatttaagactccttccattcagaacaaagcctccttccaacct
ggaggtccttcaggatttcctaagataggagcaggtccttcatttgggaaaatagtcggt
cctgctcagaaaggaccagacctccccactccacagccgcatcccgaggatctgaattct
ctagtgcagcgtgcagaacacatccctgctggcacccgtacccccatgtgctgcaagtgc
aacaaagtcatcagaggtcctttcctcgtggccatgggcatgtcctggcaccctgaggag
ttcaactgtactcactgccactcctctctggctgaacggggatttgttgaagagaagaac
caggtgtactgtgtgcactgctatgagcagttcttcgctcccacctgtgccagctgcaac
cagaagatccttggggaagtcatgaacgccctgaagcagacatggcatgtgtcctgtttt
gtctgtgctgcctgccaccagccaataagaggcaacacgtttcacatggaggatggacag
ccatactgtgaaagagactactacaccctgtttgggaccaactgccatggctgcgacttc
cccatcgaggccggagacaagttcctggaggcactcggattcacctggcatgacacctgt
tttgtttgcgcagtttgttccacaagcctggaaggtcagcccttcttctccaaaaaggac
aagcccttgtgcaagaagcatgcacattctgtcaacatctaa
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