Cyprinodon variegatus (sheepshead minnow): 107103091
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Entry
107103091 CDS
T06110
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107103091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107103091
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107103091
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
HECT type E3
107103091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Ant-IIb_sub-bd
Motif
Other DBs
NCBI-GeneID:
107103091
NCBI-ProteinID:
XP_015258098
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MGKQKIGSYLMCFKFTEFVRCDEKIQAVSCGDEVTLLSESGKIFCMDPNLTPFQSSPLQA
LSSIIITQIACGSHHTLALAKGGGVYTWGEDSRGQLGLGTGNSGSGSPQHVQTLSAIPVV
LISAGAEHSFALSVSGGVFGWGGNDCGQLGLGDSEDRNTPTSVSYLNMKKVVHISCGKEH
TVVLTKDGVVFTFGSGKYGQLGHNSFQNELRPRLVAELWGAKVTKTACGRYHTLVLTDPL
NVYSFGCNDHQQLGREDNSLSVPLPVQLPICATNGHRIEDIFAGPDCSFATWRPKEDGSN
SKADTKQRPIERMVAKWIPDCDGKLWKVTKQEIHSTFSSASIMNQSFLDQRKDKHFQTSP
NYPGLDLSLAKREFENLIEEDILQDEVENAVLMLLPSLNNKPVGVEGLRVFLVLNELLHA
IQKKYGPQSFKLFGEVVAAFQKLPPESLQIIGVWWRSQPSSTMVRHVEAWKAALSLPCSR
STYRSIILILQNMYKANQNKIPEKIFRVEFNIIFLQEDLMLWRGMSNGKTEDNSPVILCD
FPFVMDLKSKKAVFDINANLTKTQHQALMKRVFHPLPKSNPCFELHLNRSSLLEDALPQL
AAADQSELKKPLLVHFNGDTKDTRVYMYDFFHHLDIVKKHPGMFMLNDSGTLAWFSSRVA
KRDRAKFHLFGILCGLALYNGSLIKLPVPLVLFKKLLDQEPSLEDMMEFSPVVGRTLQEI
LNYKDDILEGLFIDFKINWDEKDVDLDPRNPEKLVTEQNKKEFVDAYVNYAFNESVESVF
QEFKRGFFQVCDQQLVKLFGPEELQGVLVGGGTYDWATFKQNTLYEGIDRRHPVIKMFWE
VFDELEEEQKKDFLWFLTGFRKVPVMGMDQIKMRIRPKQVLSGPHDQHFPESLTCHFILE
LPLYSTKEIMRERLTEALRPERGFEE
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcagaagattggctcttacctgatgtgctttaaattcacagagtttgtgcgt
tgtgatgagaagatccaggctgttagttgtggagatgaagtgactctgctgtctgaaagt
gggaaaatcttctgtatggacccaaatctcactccatttcaatccagccctctccaagct
ctatccagcatcataataactcagattgcctgtgggagccatcatactcttgcacttgct
aaaggtggtggggtgtatacatggggcgaggactctaggggtcagttgggactgggtacg
ggtaattctggttctggttccccccaacatgtccagactctgtccgccatccctgtggtg
ctgatctctgcgggagcagaacacagcttcgccctctccgtgtctggaggcgtgttcggc
tggggtggaaatgactgcggacagctcgggctgggagactctgaagatagaaacacacca
acatcagtcagttatctgaacatgaagaaagtggttcatatttcctgtggaaaggaacac
actgtggttctgacaaaggatggtgttgtgtttacatttggttctggcaaatatggacag
cttggacacaactcattccagaatgagctccgtcctcggctcgttgcagagctctggggg
gcaaaggtcaccaaaactgcatgtgggaggtatcacacattagtgctgactgatcctctg
aatgtttactcctttggttgtaatgaccaccagcagctggggcgtgaagacaattcttta
tctgtcccattacctgtacagctgcccatctgtgccacaaatggtcacagaattgaggac
atcttcgctggaccggattgttcatttgcaacctggagacctaaagaggatggatcgaac
tcaaaagccgacacaaaacaaagaccgattgaaagaatggtggctaaatggatccctgat
tgtgatggaaagttgtggaaagtgacaaaacaggaaattcattccacattttcctccgct
tcaattatgaatcaaagttttcttgaccaaaggaaagacaaacatttccagacttcacca
aactatcctggtttggacttatctttggcgaaaagagagtttgaaaacctaattgaagag
gatattcttcaagacgaagtggaaaatgcggttctaatgttgcttccttctcttaataac
aagccagtgggagtggagggtttgagggtcttcctggtcctgaatgagcttcttcatgca
attcaaaaaaaatatggacctcagagctttaagctgtttggggaggttgttgctgccttc
caaaaacttccaccggaaagcctccagattataggagtctggtggcgctcacaaccatcc
tctacaatggtcagacatgtagaggcctggaaggcagccctctcattgccatgtagtcgc
tccacatacaggtctatcatactgatccttcagaacatgtacaaggcaaaccagaacaaa
attcctgaaaagatatttcgtgtggagtttaacataatttttcttcaagaggatctgatg
ctttggcgaggaatgtcaaatgggaagactgaagataattcacccgtcatcctctgtgat
ttcccatttgttatggatctgaagtcaaagaaagcagtttttgatattaacgctaatttg
actaagactcaacaccaggctttgatgaagagggtttttcatcctctcccaaagtcaaat
ccttgttttgaactgcatctgaaccgctcctcccttttggaagatgccctccctcagctg
gcggctgctgatcaatctgagcttaagaaacctctcctggtgcatttcaatggagacaca
aaagacacacgagtctacatgtacgactttttccaccacctcgacattgtgaaaaaacac
ccggggatgttcatgctgaacgattctggaacgctggcatggttctcctccagagtagca
aaaagggacagggcaaagtttcacctgtttgggattctgtgtggattggccttatacaat
ggcagcttaataaagctgccagtcccactggttctgttcaaaaagcttctcgatcaagaa
ccgagtctggaggatatgatggagttcagcccagtagttggacgaactctgcaggaaata
ttgaactataaagatgatatcctggaaggcctgttcatagactttaagattaattgggat
gagaaagatgttgacctcgatccaagaaatccagaaaagctggtcacagagcaaaataag
aaggagtttgtcgatgcctatgtgaattatgccttcaacgagtcggtggagagcgtgttt
caggagttcaagcgaggcttcttccaggtgtgtgaccaacagctggtgaagctttttgga
ccagaggagctgcagggagtgctggtgggtggaggcacctatgactgggcaacattcaaa
cagaacacactgtatgaggggattgacagaaggcatccagtaataaagatgttttgggag
gttttcgatgagcttgaggaagaacagaaaaaagactttctttggttcctgactgggttc
cggaaagttcctgttatgggcatggaccaaatcaagatgagaattcgaccaaaacaagtc
ctgagcggcccccatgaccagcatttcccagagtctctgacgtgtcactttattctggag
ctgccattgtactcgaccaaagagatcatgcgggaaagactgacggaggccctgagacca
gagagaggattcgaggagtga
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