Cyprinodon variegatus (sheepshead minnow): 107103094
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Entry
107103094 CDS
T06110
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107103094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107103094
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107103094
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
HECT type E3
107103094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
107103094
NCBI-ProteinID:
XP_015258102
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MFSWGEDCQRGFWLKGDFSTDEGVHHLNVDYKLSDVSVGRSVLAFVKSNGNAFILRTYEN
KDGNRVRGKQKFVKCKEKIEAVSCEDDVVTLLSERGSVFCVDTTRTPYSPRTLDVFSNIP
VAQVACGSQHSVALTKECQVYTWGLDSRGQLGLGKRGSGARSPQQVRSLSSVPVVQISAG
GDHSFALSVSGGVFGWGRNNCGQLGLGGTKDVFTPTCVSSLNLKKTSDICCGKDHTAVLT
KQGAVFTFGSGQYGQLGHNSLQNELRPRLIAELWGTKVIKIACGGYHTLALTDGRKVYSF
GCGEQGQLGNRTENCPSVPLPVLLPRVADSNQPKIGTIFAGENCSFATCSSEECVDRNLD
AKRINNATKHGLEDMVDNWISNCDSKSWKKTKQEIRRTFSTASCLNKSFLEQMRDKHFQT
SSKCHGLNFKLARQYFKKLVKVDIVWKEVEAAILHLLPLLDKNPVAVESLRIFLLLNELL
HVIQKHRKQQSSKLAETVAAVVSSLSMTSLEVLGEWWSLLSRSSMGRFVSVWRQALSGIL
SKYDAPRSSGVRNLLEVLQYMHNINSRVAESRRLPESEFYLSIDQDFLLDDLDMWRLKSK
RWYAHSEPLVLCNFPFVMNLQAKTLVFYTNTELNTEEVVMSSLEMFMHMILDFELCFPDP
PGLLLQLNRASMLKDTFEQLAQADESSYKKKLVVFFHGNYNIDDVLLNIKDFFHAVFKEL
MSPVSRMFMFNDSQTLAWFSSKASEKDQNFYLFGVLCGLALYNSMLIYLPFPLALFKKLL
GVRPTLEDLKEFSPSVGKSLQCILDEYTDEDLEDIFFSIPWDGTEVDLDPENPEKQVTSK
NKHEFVDAFVDHVFNVSVKTAFEEFKKGFLQVCDRDLVRLFRPKELQEILVGNDFHDWER
LKQSTIYEGQFNADHPTIQTFWEVFDELTENQKKTFLWFVTGFERVPVLGLDKIQMKIKE
IDKKDHSHDQYFPETHTCFSTLELPLYSSKEIMQTKLIEALSNKRINPCV
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatggggagaggactgtcagcgaggcttctggctgaaaggagacttcagcaca
gatgaaggagtccatcatttaaatgttgattataaactctcggatgtgtctgtaggtcgc
agtgtgctggctttcgttaaaagtaacgggaacgcgtttattttgcgcacttatgagaac
aaagatggaaacagagttcgaggaaaacagaagtttgtgaaatgtaaggagaagattgag
gctgtgagctgtgaagatgatgtggtgacgctgctgtctgagagaggctcagttttctgc
gtggacacgactcgcaccccgtactcacccaggacgttggatgttttctctaacatacca
gtagcacaggttgcttgtgggagccagcactcagttgccctgacaaaagagtgtcaggtg
tatacatggggccttgactccaggggtcagctgggtctgggaaagagaggttcaggagcc
agatcacctcaacaagtccgatccttgtcgtcagtcccagtggttcagatctctgcagga
ggagaccacagctttgccctctctgtgtcaggaggcgtgtttggctggggaagaaataac
tgtggacagcttggactaggaggaacaaaagatgtatttacaccaacttgtgtcagtagt
ttgaatctgaagaaaacgagcgacatttgctgtggaaaggaccatacagccgttctgaca
aagcagggggcagtgtttacatttggctctggtcagtatggacaacttggacacaattca
ctgcaaaatgaactccgtcctcgacttattgctgaactgtggggcactaaagttatcaag
attgcatgtggcggatatcacactttggctttgacagacggccgtaaggtctactccttc
ggttgcggggagcaaggtcagctgggaaacagaacagaaaactgtccatctgtgccgctt
cctgttcttctacctcgggttgcagactcaaatcaacccaaaataggaactatctttgct
ggagaaaactgttcatttgcaacatgctcttctgaagagtgtgtggacagaaatctagat
gctaaaagaatcaataatgcaactaaacatgggctggaagacatggttgataactggatc
tctaactgtgatagcaagtcatggaaaaagacaaaacaggaaatccgcagaacattttca
actgcatcctgtctgaataaaagcttcctagagcaaatgagagataaacatttccagacc
tcttcaaaatgccatggtctgaactttaagctggctcgacagtattttaagaaattggtg
aaggtggacatcgtttggaaagaggttgaagctgcaattctgcatttgcttcctctcctt
gataagaacccagttgcagtggaaagtctgaggatctttctgctccttaatgagctcctt
catgtcatccagaaacacaggaagcagcagagcagcaagctcgctgagacggttgctgct
gttgtttcaagcctgtcgatgacaagccttgaggttttaggggagtggtggtccttgcta
tctcgatccagcatggggagatttgtgagcgtgtggaggcaagctctctctgggattttg
tccaaatatgatgctcctcgcagtagcggtgtcagaaacctgcttgaagtacttcagtac
atgcataatattaacagcagggttgcagagtcacgaaggctgccagaaagtgagttttat
ctgtcgatcgaccaagattttctgcttgacgacctggacatgtggcgtttaaaatccaaa
cgctggtatgcgcattctgagccacttgttctgtgcaacttcccatttgtgatgaatctg
caggcaaagacgctggttttctacacaaatactgagctcaacacggaagaggttgtgatg
tcttccctggagatgtttatgcatatgattctggacttcgaactttgtttccctgaccct
ccaggcctcctactgcagttaaaccgagcatctatgttaaaggatacatttgaacagctg
gctcaggctgatgaaagcagctacaagaagaaacttgtggtatttttccatgggaactat
aacattgacgatgtcttgctcaatataaaagacttcttccatgcagtatttaaggaactg
atgtctccggtgtcaaggatgttcatgttcaatgactcacaaacactggcatggttctcc
tccaaagcttcagagaaggaccagaatttctatctgtttggagttctctgtggacttgct
ttgtacaactctatgctcatttaccttcccttccccctggcgctcttcaaaaagcttctg
ggagtgagacctacactggaagatttgaaagaattcagtccaagtgttggaaagagtctg
caatgcatcctggatgagtacacagatgaggacctagaagacatatttttttcgatcccc
tgggatggaacagaggtcgatcttgatcctgaaaatcctgaaaagcaagtaacgagtaaa
aacaagcacgagtttgtggacgccttcgtggaccatgtcttcaatgtttctgtgaagact
gcatttgaggaatttaaaaaaggttttctccaagtttgcgaccgggatttagtgaggctg
tttaggccaaaggaactacaagaaatcctagttggaaatgacttccatgactgggagaga
cttaaacagagtacaatttatgagggccagttcaatgctgaccatccgaccatccagaca
ttttgggaggtttttgatgagctaactgagaatcaaaagaaaacttttttgtggttcgtc
actggatttgaaagagtgcctgtactcggattggataagatacagatgaaaataaaagaa
atagacaagaaggatcactctcacgaccaatacttccctgagacgcacacttgtttctcc
acattggagctgccgctgtattcaagcaaagagatcatgcaaaccaaactgatagaggct
ctgagcaacaaaaggatcaacccctgtgtttga
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