KEGG   Cyprinodon variegatus (sheepshead minnow): 107103115
Entry
107103115         CDS       T06110                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107103115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107103115
   03036 Chromosome and associated proteins [BR:cvg03036]
    107103115
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     107103115
Chromosome and associated proteins [BR:cvg03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     107103115
    COMPASS/SET1 complex (yeast)
     107103115
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_SPT8 WD40_RFWD3 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD_LRWD1
Other DBs
NCBI-GeneID: 107103115
NCBI-ProteinID: XP_015258130
Ensembl: ENSCVAG00000008783
UniProt: A0A3Q2CNZ3
LinkDB
Position
Unknown
AA seq 315 aa
MKISDSLLRSFKVARIHRYHSEKVNCVHYSANGEHAVSSGNDDCIVLYDIQEGKPSRTLY
SKKYGVDLIRFTHGEAKNVVFSSNKLDDTIRYLSLTDNKFIRYFPGHSARVTALSMSPVD
ETFISSSLDKTIRIWDLRSPDCQGLTDPLGKPVCSFDPDGLVFAAGVESQAIKLYDIRAF
DKGPFACFETRLNRSCDWTGLKFSNDGKLILICTNGGAVRILNAFSGSVLHTFSGYNNSK
GVSLEASFTPDSKFVMIGSEDGRVHVWSTESGMKVAVLDGKHPGPINGLQFNPRYMTFAS
ACTNMSFWLPCIDDL
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagatctcagacagcctcctgaggagttttaaagtcgccagaatccaccgatatcat
tcagaaaaagtaaattgtgtccactacagcgccaatggtgaacacgccgtttcaagtggc
aacgacgactgtattgttttatatgacatccaggagggaaaaccgtccaggactctgtac
agcaagaagtatggagtagatctgatccgcttcacacacggggaggccaagaatgtggtc
ttcagctccaacaaactggatgatacaattagatatctgtcgcttactgacaacaagttt
atccgatatttccccggtcactctgcaagggtaactgcactatccatgtctcctgtggat
gagacattcatctccagctctttggataagactatccgcatctgggatctgcgttccccc
gattgccaaggtttgactgaccctctggggaaacctgtgtgctcctttgacccagatgga
ttggtatttgcagcaggagtggaatcccaggctatcaaactgtacgacatccgtgctttt
gacaagggtccctttgcatgttttgagaccagattaaatcggagctgcgactggactgga
ctgaaattcagtaacgatggaaagcttattcttatttgcaccaatggaggtgctgtccgc
atcctgaacgcctttagtggatcagtgctgcacactttttcaggttataacaacagtaaa
ggcgtctccctggaggcctccttcacaccagactcaaagtttgtcatgattggttcagag
gacggacgagttcatgtttggagtactgaaagtgggatgaaggtggccgtgctggatggc
aaacacccaggacctatcaacggtctacagtttaaccccagatacatgacatttgccagc
gcatgcacaaacatgtctttctggctgccgtgtattgatgacttatag

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