Cyprinodon variegatus (sheepshead minnow): 107103156
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Entry
107103156 CDS
T06110
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4 isoform X1
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvg03032
]
107103156 (recql4)
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107103156 (recql4)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107103156 (recql4)
DNA replication proteins [BR:
cvg03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
107103156 (recql4)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
107103156 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Drc1-Sld2
zf-CCHC
FAM13A
zf-CCHC_3
ResIII
zf-CCHC_5
DUF7627
Motif
Other DBs
NCBI-GeneID:
107103156
NCBI-ProteinID:
XP_015258188
LinkDB
All DBs
Position
Unknown
AA seq
1536 aa
AA seq
DB search
MDRYNELKLQLKSWEQEFLKQHQRKPTKEDIDRAPEETRRLYKEYRSLKQVKGISSNDAS
SDQRQAAATAETNPTNKELDCWGAHLNRKAMPVSAPRLSSRERDDLMTSSQYYGLKLKNN
LAALSKEKPVSLKKPHRTGRVPLNSLKDDQESQNKNLSTVSASAEEQEEELLMPRGMKPF
LGSATPKSLHAAEPEEHFKPFKPESEQGDAVNGCSDSSSVSSHHCTSNSSQLQGVKTSLP
ARSSPLLSSLSPQCLIESTGKENKGTVDKVEDPNSGSPTKKVDPEVPGGLKRSPPLLAQG
GLVKRPSLANRLSFLDRNWLERCQVFGEMEAEEIPGGGNREMREKEIQEKEVREEKAKRD
LEGNRRQSVDLGEEEKSANALRDNPNPATDCALRGAGEKKGTGNIERGQASPLPRDHNDK
DGLKSEGAKKRGRKRQREGDDTVGSVTVDGAKKKRRNNKKSEESSAVSPDPADGGEGKKK
KTKRKDIAEREKKEATQEAKKAPQENLLGELQEEFRTKTFKTQPVKARGTKGAEGNFVKI
NLKTKSHVKGYALRGVALRKQLYMQKFQLKGERFGGGAGYFGRGRRGGFRGSLSRQGDTC
YKCGGTGHWALDCKGRVPPPPVSEDPPAEEEPFELPTLEEVARATGTLKPQPLAATPCVK
AEQHQEESGVDSGQTDEMLLNVIRPDYERPAPPPPMEPLYPLTEDGTVQETPAEVYAALR
ELGYQSFRPGQEKAIMRILTGLSTLVVLSTGMGKSLCYQLPAYLYAQRSKCITLVISPLV
SLMDDQLSGLPTKLKAACIHSNMTMKQREAAVEKVKSGQVCLLLLSPEALVGGGGSGSGC
LPSAQELPPVAFACIDEAHCVSEWSHNFRPCYLRLCKVLRERLGVKCLLGLTATATLSTA
LDIAQHLDISDKDGIAVRSAAVPPNLNLSVSMDREKDQALVCLLKGDRFGCLDSIIVYCT
RREETVRVAALLRTCLQGVALKENTQISSNQIQNNPVGQKKKELARKKIRKPLKWQAEAY
HAGLSGSERRRVQNNFMCGELRIVVATVAFGMGLDKSDVRGIIHYNMPKSFESYVQEIGR
AGRDGEPAHCHLFLDPEGGDLQELRRHIYADTVDYYIIKKLVQRVFPACKCKKIQQKQQE
LWKEVEDTDLLEMMDVCDPDAQEKPTEEKQESIHLEVSDLDSAAQIPVHSGEGNGRQEQG
ESEEGKDKEADGHSEQKEDSWDWPEERVCHTHERAIPIQETVEALDITEEGIETLLCYLE
LHPQRFVELLHPTLSACKVRCYDGPRQLQKITKICPPVAVVLARQRMRGERVESLDQVEF
DVVEVADTMGWQLPMVKRGLRQLQWSTERGGGRSGIHVEFSSPSFYFRSFGDLSDEEMDR
VCQFLYNRVQDQERTQLYQLTACFKAFKSVAFQSAMSCVNDLDESRSLQLKNLLSEYFDR
RRDREHALQPVDLEEPDKYRLLDWENQIRADIRSFLGNRSDERFSGRAVARILHGIGSPC
YPAQIYGKDRRYWRKYIQFDFNQLIRLATQEILHFK
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctacaacgagctgaaactacagctgaagagctgggaacaggagttcctgaag
cagcaccagaggaaacccactaaggaggacatcgatcgagctccagaggagaccaggagg
ctgtataaggagtataggagtttaaaacaagttaaaggaattagcagcaacgatgcatcc
agtgaccaaagacaagctgcagccacagcagagaccaacccaaccaataaggaattggac
tgttggggagcacatctgaatcgcaaagcaatgccggtgtctgctccaagactgtcatcc
cgggagagggacgacctcatgacttcttcgcagtattatggtttgaagcttaaaaacaac
ctcgctgcactcagtaaggagaaacccgtttctctgaagaagccccaccgaactggtcga
gttcctctgaattccttgaaagatgatcaagaatcacaaaataaaaacctctctactgtt
tctgcctcagctgaagaacaggaagaggaacttctcatgccaagagggatgaagccattc
ctggggtcagcgacccctaaaagccttcatgcagcggagcctgaagagcactttaaaccc
tttaaacctgaatcggaacagggtgatgctgttaacggctgcagtgacagtagctctgtt
agttcccatcactgtaccagtaatagttctcagcttcagggcgttaaaacttctcttcca
gccagatcctcccctctgttatcatctttatcccctcaatgtctcattgaaagcacagga
aaggaaaataaaggtacagtagataaagtggaggatccaaactcaggaagcccaactaaa
aaggttgaccctgaagttccaggtggtcttaaacggagcccacctttacttgctcaaggg
ggtctagttaaacggccctctcttgccaacaggctgagcttcttggaccgaaattggttg
gaaaggtgtcaggtgttcggagagatggaagctgaggagatccctggaggaggaaaccgg
gaaatgagagagaaggagatacaggaaaaggaagtaagagaagaaaaagctaaacgagat
ttggagggtaatcggagacaatctgtggacttgggagaagaagaaaagtcagctaatgct
ttgagggataacccgaaccctgcaacagactgtgctttacgaggcgctggggaaaaaaaa
ggaactggcaacatagagagaggacaggcatcgccccttccacgagaccataacgataag
gatggtctgaaatcagaaggtgcaaagaagagggggcgaaagaggcagagggagggggat
gacacggttggatctgtcacagtagatggagccaaaaagaagcgaaggaacaacaaaaag
agcgaggagagctcagctgtaagtcctgatccagccgatggaggggaagggaagaaaaag
aaaacaaaacgaaaagatatcgcagaaagggaaaagaaggaagcaacacaggaagcaaag
aaggctcctcaggaaaaccttttaggggaacttcaggaggaatttagaactaagactttt
aagactcagccagtcaaagccagaggaacgaaaggtgcagaggggaactttgtgaagata
aacctaaagacgaaatctcacgtgaaaggatatgctttacgaggagttgctttacgcaaa
cagctttacatgcagaagtttcagctgaaaggggagcgatttggtggaggtgctggatat
tttggccgaggacggaggggcggattcagagggtcgctgagtcggcagggggacacctgt
tacaagtgtggagggaccggacactgggctctggactgcaaaggacgagtccccccacca
cctgtttctgaggatcctcctgcagaggaggaaccatttgaactgcccaccctggaagag
gttgccagggcaacaggaacgctcaaacctcagcctttggcagcaacaccgtgtgttaaa
gctgaacaacaccaagaggaaagtggagtggacagtgggcagacagatgagatgttgctt
aacgtaattcgccctgattatgagcggcctgctccaccaccaccaatggaacctctttat
cccctcacagaagacgggacagtccaggaaacccctgctgaagtctatgcagctctgaga
gaacttggctatcagtccttcagaccaggacaggagaaggccataatgaggatcctgaca
gggctgtccaccctggtggtgctgtccactggaatgggtaaatcactgtgctatcagctg
cctgcttacctgtatgcacaacgatccaaatgcatcactctggtcatttcacctctagtt
tctctaatggacgatcagctgtcgggcctgcccaccaagctgaaggctgcctgcatccac
tctaatatgaccatgaaacaaagagaagctgctgtagaaaaggtgaagtctggccaggtt
tgcttgctgcttctgtctccagaggctttggtcggaggaggaggttcaggttcgggatgc
ctgccctctgctcaggagctccctcctgtggcgtttgcctgtattgacgaggctcactgt
gtgtcagagtggtcacacaacttcagaccctgctacttgaggctttgtaaggtcctcagg
gagcgccttggagtgaagtgtttgctgggactcacagctacagccactctgtccactgct
ctggacattgctcagcatttggacatcagcgataaagacgggatagctgtgaggtctgca
gctgtaccgcccaacctgaatctgtccgtgtccatggatagggagaaagatcaggcttta
gtgtgtttgttgaaaggagatcgttttggctgcttggactccatcatagtctactgcacc
aggcgagaggagaccgtccgggtggctgcactgctgaggacctgcctgcaaggggtggca
ttgaaagaaaatacccagataagcagcaaccagatacagaacaacccggttggacagaaa
aagaaggaactggctcggaagaagatccgcaaacccctaaaatggcaggcagaggcgtac
catgccggcctgtcggggtccgagcgtcgccgtgtccagaacaacttcatgtgtggggag
ctcagaatcgtagtggccactgtagcgttcggcatggggctggacaaatccgacgttcgt
ggtatcatccactacaacatgccaaagagctttgagagctacgttcaggaaatcgggaga
gctggtagggatggagaaccagctcactgtcatttattcctggatcctgagggtggggac
cttcaagagctccgtcgccacatctacgcagacactgtggattactacatcatcaaaaag
ctggtgcagagagtgtttcccgcctgtaaatgtaagaagatacagcagaaacagcaggag
ctctggaaggaggtggaagacactgatttgttggagatgatggatgtctgtgatccggat
gcccaggaaaaaccaacagaagaaaagcaagaatctattcacttggaggtgtctgacctc
gattcagctgcacagattcctgtgcacagtggggagggaaacggaagacaagagcagggc
gagtcagaagaaggaaaagacaaggaagcagatgggcatagtgagcagaaagaggacagc
tgggattggcctgaggagcgggtgtgccatacccacgagagagccattcccatccaggaa
accgttgaggctctagacatcacagaagaaggtattgaaacccttctctgctacctggag
ctgcatccgcagcgatttgttgagcttctccacccaactctgtctgcctgtaaagtcagg
tgctacgatggaccaaggcaactccaaaaaatcaccaaaatttgtcctccggttgccgtg
gtgttggccagacaacgaatgagaggcgagcgggtggagagtttggatcaagtggagttt
gatgttgtcgaggtagcagacactatgggatggcagcttcccatggtgaaaagaggactc
agacagctgcagtggagcacagagagaggaggtggaagaagcggcatccatgttgaattc
tcttccccgtcgttttacttccgatcttttggagacctgagtgacgaagagatggacaga
gtttgtcagttcctttataaccgagtgcaggatcaggaaagaacacagctgtatcagctc
acagcctgctttaaggccttcaagagtgttgccttccagagtgctatgtcctgtgtcaac
gacttggatgagagtcgcagtctgcagctgaaaaaccttctctctgagtactttgaccgg
cgtcgagacagagagcatgcactgcagccagtggacctggaggagcccgacaaatacagg
ctgttggactgggagaaccagatcagagcagacatcagaagtttcctcggcaacagaagt
gatgagaggttttctggcagagctgttgcaagaatcttgcatggcataggcagtccttgt
tatcctgcccaaatatatggtaaagatcgccgttactggaggaaatacatccaatttgac
ttcaaccagctcatcaggctggctacccaggagatacttcacttcaagtga
DBGET
integrated database retrieval system
