KEGG   Cyprinodon variegatus (sheepshead minnow): 107103227
Entry
107103227         CDS       T06110                                 
Name
(RefSeq) integrin beta-5-like
  KO
K06588  integrin beta 5
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04145  Phagosome
cvg04148  Efferocytosis
cvg04510  Focal adhesion
cvg04512  ECM-receptor interaction
cvg04810  Regulation of actin cytoskeleton
cvg04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107103227
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107103227
   04148 Efferocytosis
    107103227
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107103227
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107103227
   04810 Regulation of actin cytoskeleton
    107103227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvg04131]
    107103227
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cvg04515]
    107103227
Membrane trafficking [BR:cvg04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    107103227
Cell adhesion molecules [BR:cvg04515]
 Integrins
  Integrin beta subunits
   107103227
SSDB
Motif
Pfam: Integrin_beta PSI_integrin vWA_SIBA-E PSI
Other DBs
NCBI-GeneID: 107103227
NCBI-ProteinID: XP_015258289
LinkDB
Position
Unknown
AA seq 337 aa
MYMRSLWGPQELRAPDVRCCFSCFYFCSPPNFAADLLLPGLNVCMSGSATSCEECLLINP
SCAWCAQEDFGKRRSLTSRCDFKQNLQKRGCEPRFIESPRSAASVLESRPLSSKGSGAAH
DVVSITPQKISLSLRPGDPVSFNLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRMLGTKL
AEEMGKLTSNFRLGFGSFVDKNMSPFSYTAPKYQENPCNGYKLFPNCVPTFGFRNILSLT
DKVDRFNEEVQKQLVSRNRDAPEGGFDAILQAAVCKKEIGWRKEASHLLVFATDDVPHLA
LDGRLGGLVQPHDGRCHLDDQNEYSASTKMVRGFGGL
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgtatatgaggagtttatggggccctcaggaacttagggctccagatgtcaggtgttgt
ttctcctgtttctacttttgttctcctccaaactttgccgctgatcttctcctcccaggt
ctgaacgtctgtatgagcggcagcgccacgtcctgcgaggaatgcctcctgattaacccc
agctgcgcctggtgcgcccaagaggactttgggaagcggcgttctctgacgtcacgatgc
gatttcaagcaaaatctgcaaaagaggggctgcgagcctcgcttcatcgaatccccgagg
agcgcggcgtccgtcctggagagccgtcccctgagcagcaagggatcgggggcggcgcac
gacgtggtcagtatcacgcctcagaagatctccctcagcctgcggccaggagaccccgtc
tcgttcaacctgcaggtacggcaggtggaggactaccctgtggacctctactacctgatg
gacctctcgctgtccatgaaggacgacctggacaccatccgtatgctcggcaccaagctg
gccgaggaaatggggaagctgaccagcaacttccgcctgggcttcggctccttcgtggat
aaaaacatgtcccccttctcctacaccgctcccaagtaccaggagaatccctgcaacgga
tacaagctcttcccaaactgcgtccccaccttcggctttcgtaacatcctctctctgacc
gataaagtggaccgcttcaacgaggaggtgcagaagcagctggtgtcgcggaaccgggac
gctccggagggcgggttcgacgccatcctgcaggcggccgtttgcaagaaggaaatcggc
tggaggaaggaggcctcgcacctgctggtgttcgccacagacgacgtgccgcacctcgct
ctggacggtcggctgggaggactggtccagccgcacgacggccgctgtcaccttgacgac
cagaacgagtacagcgcctccacaaagatggtgagaggatttggtggtttatga

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