Cyprinodon variegatus (sheepshead minnow): 107103294
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Entry
107103294 CDS
T06110
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107103294 (gtf3c3)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
107103294 (gtf3c3)
TFIIIC, fungi type
107103294 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_8
TPR_1
TPR_14
TPR_11
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_9
TPR_EMC2
TPR_IFT121
Motif
Other DBs
NCBI-GeneID:
107103294
NCBI-ProteinID:
XP_015258430
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MSGFSAELLDYLEGRITFEEFDRRRDERNPEQESEDPAEEENQPSTSAQTTAAIEDGVSP
VVQQAFASILGEAAAAPSSDEEEDSLSYVDDEGDQDYRVEEEAAAKETTKGRKRRPKRGG
KRSLLSSLDEEEEDMTVGDVFKLEQELNRENRKSMKGRRHGSKLPQALRGLMGEANIRYA
RGEKEDAILMCMEIIRQYGDVDKALQFGLIAAHLNPSDHEEWIRLAEMSLEQDNIRQAVI
CYSKAIKYDPTNVRYLWERSSLHMRLGEHKQCMDGYRRILSLLAHEDGEHFMQLSKDMAK
SYYESNDLPSALSVVEEALTRHPGLVTDDFVNMAAELYICSRQFKEALQVLVKFTDILLI
RAESSPEGAAQREPGTEGQQEEEEPKSSRDSEDSREIVDVQVPDSVPVNLRAKLIVCLIH
LCSFIFTMFMTCSECLKALGRLEEAADSYSKVVEMAPLHLEARLSLATLQQQLGRMDCAL
KALEPMYDSDTLAQDSSAAQKELKLLLHRSTLLKTQGQMEDYLDAMITMISMLLKVAMQR
AKVCVRSVTLEGRSHLRLVKVQDLQPEIADHETAYLDNMCKTNFLSKEDWWQLLLSCLLG
LCELRRYGETDLLVESAMEFYSFYDSKPRRKELEFFGLSATILNQDFFKAYNYMRLMLVE
NLHFPQFWNIFHQLTLSSEHQRHHRYCLRLLLKHPDNPALCVLCGHNAAVCGSFKHALGQ
YVQALKNQPENPLHSLYVGLTFFHMASQKYVARRHALILQGFSFLWRYVELRGECQESMF
NLGRALHQMGLAHLAIHYYQKALSLPAWKLDGIADDQVDLRREIAFNLSLIYQNSGNLEM
ARQILRAHCTV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgtccggattcagcgctgaactcctggattacctggaaggaagaatcaccttcgaagag
tttgacaggcggagagatgagcggaacccggagcaggagtcagaagatcctgcagaggaa
gaaaaccaaccttccacctcggctcagaccacggcagccatagaggacggggtcagcccg
gtggtccagcaggccttcgcttccatcctgggggaggcagcagcagcgccttcctctgac
gaagaggaggacagcttgagctacgtggacgacgaaggcgatcaggattacagagtggag
gaggaagcggcggcgaaggagacgaccaaggggaggaaaaggaggccgaagcgaggaggg
aaaaggagcttgttgagcagcctggatgaagaggaggaagatatgacggtgggagacgtc
ttcaagctggagcaggagctcaaccgagaaaacaggaagtccatgaagggtcgtcgtcat
ggcagcaagctgcctcaggcgctcaggggcctgatgggagaggccaacatccgctacgcc
cgaggggagaaggaggacgccatcctgatgtgcatggagatcatcagacagtacggagac
gtggacaaggcgctgcagtttgggctgattgcggcccacctcaacccgtcagaccacgag
gagtggatccggctggccgaaatgtctctggagcaggacaacatccgacaggccgtcatc
tgctacagcaaagccatcaagtacgaccccaccaatgtgcgctatctgtgggagcgctcc
agcctccacatgcgtctgggggagcacaagcagtgcatggacggttaccgcaggatcctg
tctctgctggctcacgaggacggagagcacttcatgcagctgtccaaggacatggctaag
agttactatgagagcaacgacctgccgtcggcgctcagcgtggtggaagaagctctgacc
cgacaccccggcttggtcaccgacgacttcgtcaacatggccgccgagctctacatctgc
agccggcagttcaaggaggccttgcaggttctggtgaaatttacagacatcttgttgatt
cgggccgagtcctcgccagaaggcgccgctcagagagagccggggaccgaggggcaacag
gaagaggaggaaccaaagtccagccgggactccgaggacagccgagagattgtggacgtc
caggtcccagacagcgtccctgtgaacctgagggcaaagctgatcgtctgcctcatccac
ctgtgcagctttattttcacaatgtttatgacttgttcagagtgtctgaaggccctgggc
cgcctggaggaggcggcggacagctacagcaaggtggtggagatggcgccgctgcacctg
gaggcccggctgtctctggccacgctgcagcagcagctggggcggatggactgcgctctg
aaggcgctggagcccatgtatgacagcgacacgctggcgcaggactcgtccgccgcccag
aaggagctgaagctgctgctgcaccggtccacgctgctgaagacgcagggccagatggag
gactacctggacgccatgatcaccatgatctccatgctgctgaaggtcgccatgcagcga
gccaaggtgtgtgtccgctccgtgacgctggaaggaaggagccacctgaggctggtgaag
gttcaggacttgcagccggagatcgccgaccacgagaccgcctacctggacaacatgtgt
aaaaccaactttctctccaaggaggactggtggcagctgctgctcagctgcctgctgggg
ctgtgcgagctgcggcgctacggggagacggacctcctggtggagtcggccatggagttc
tactccttctacgacagcaagcccaggaggaaggagctggagttctttggcctctccgcc
accatcctcaaccaggacttcttcaaggcgtacaactacatgaggttgatgctggtagaa
aaccttcattttcctcagttctggaacattttccaccagctgacgttgtcctccgagcac
cagcgccaccatcgctactgtctgcggctgctgctcaagcacccggacaacccggctctg
tgcgttctgtgtggacacaacgccgccgtttgtgggagcttcaagcacgcgctaggccag
tatgtccaggccctgaagaaccagcctgaaaacccgctgcacagcctctacgtgggcctc
accttcttccacatggcgtcccagaagtacgtggcccggcgccacgctctcatcctgcag
ggcttctccttcctgtggcgctacgtggagctgcgcggggagtgtcaggagagcatgttc
aacctgggccgggccctgcaccagatgggcctggcccacctggccatccattactaccag
aaggcgctttccctgcctgcgtggaagctggatggcattgcggacgatcaggtggatctg
aggagggagattgctttcaacctgtcgctgatctaccagaacagcgggaacctggagatg
gcgcggcagatcctcagagctcactgcaccgtgtga
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integrated database retrieval system
