Cyprinodon variegatus (sheepshead minnow): 107103320
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Entry
107103320 CDS
T06110
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107103320 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107103320 (nup85)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107103320 (nup85)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107103320 (nup85)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107103320 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
107103320
NCBI-ProteinID:
XP_015258463
Ensembl:
ENSCVAG00000003041
UniProt:
A0A3Q2FF12
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MEEVDVDPTVTNIPGIRHGKHMGFAWGPGDILVYETQFKPSGSLLPDAGGAFIHKVRKDE
DIYSPILRKLFNESHHIFVGLQTIKEDVPSKSKRHQFVSISRNYRSVIRACMEELQQVAV
STRDTEMATQYGNQVSILLAIELIWNLCEVLFIEAAPAGTLLLHLLDWVRLHRADVEEKA
KDVLQSDSPAEHHNYWDVVVSYVLQGRLEEARQMLGKQASLQPASRDIYKLMDGLLSKMP
FFNPAGTQTLTEFDVKWKNWHEEVDRCLSDNSFASNGHLELICKILVGDEDTLLEQKELL
GTWYHFLVTRLLYCHPTVKPIELHYYAQSCLTMFLDSRSVQEPLDSILLAAFEFDIYLVI
KDCSIVLNNWWFVAHLTDLLDHCKLLHSHNLNFGSNMREFLLREYASGLFTHHSLWQCAV
DYFDHCPELGRACLELQIERVPLDTERKALKVLRICEERQMSEQVRSICKIMAMRALRNN
RLGSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLSDRLTFLGKY
REFHKLYGEKRYKEAAKLLLSLMTAKIAPRSFWMTLLTDSLPLLEQNEVIFSADQTYDLM
YCLEELTSSLDPAAPGADRPMQEEDVEQTKVELLRLSLARNLSKAIVKEGTVDT
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtggatgttgacccgacagtcactaatataccaggaatcagacatgggaag
catatgggttttgcctggggtcctggagacatccttgtttatgagacacaatttaagcca
tcgggttccttgctgccagatgcaggtggggccttcatccacaaggtcaggaaagatgag
gacatatactccccgattttgcgcaaacttttcaatgagtcgcatcacatctttgttgga
ctgcagacgatcaaagaggacgtccccagcaagagcaaaagacaccaatttgtcagcatc
agtagaaactatagatctgtgattcgggcttgcatggaagagctccagcaagttgcagtt
tccacgagggataccgaaatggccacacaatacggaaatcaggtttctattcttttggcc
atagagctgatctggaacctgtgtgaagtgcttttcattgaagctgcccctgctggcact
ctcttgcttcaccttctggactgggtgaggttacacagggctgatgtggaggagaaggca
aaggacgtgctgcagagcgacagccctgcagagcaccacaactactgggatgtggtggtg
agttacgtcctgcagggcagattggaggaagccagacagatgctggggaaacaggccagc
ctacagccagcctccagggacatttataagctaatggacggcttactcagcaagatgccc
tttttcaatcctgctggcactcagacactaacagagtttgatgtgaagtggaagaactgg
catgaagaggtggaccgctgcctgagcgataattcctttgcgagcaacggccatcttgag
ctcatctgtaagatccttgtgggcgatgaagacactctgctagagcagaaggagttgctc
ggtacctggtatcacttcctcgtcactcgactgctctactgccaccctacagtgaaacca
atcgagttacattactacgcacagtcatgcctcacaatgttcttggactcgaggagcgtc
caggagcctttggacagcatcttactggctgcctttgagtttgacatttatctggtgatc
aaagactgcagcattgttctcaacaactggtggtttgtggctcatttaacggacctgctg
gatcactgcaaactcctccactctcataatttaaactttggatccaacatgagagagttc
ctcctgcgggagtacgcctcgggtttattcactcatcacagtctctggcagtgcgctgtg
gattactttgaccactgtccagagttggggcgagcttgccttgagctgcagatcgagcgt
gtgcctttagacaccgaacgcaaggcgctcaaagttctccggatttgtgaggagaggcag
atgtcagagcaagtgcggagtatctgtaagatcatggccatgagagctctgaggaacaac
agactgggctcagctctgtcctggagcatcagagccaaagatgctgcttttgcaaccctc
atttctgagaggtttctacaggattattgtgccaaagggactttttctgacttggatctg
attgacaatttgggaccagcgatgctcctcagtgacaggctgactttccttggaaaatac
agggagttccacaaactgtacggggagaagcgttacaaggaggctgcaaagctgctgctc
tccctcatgacggcaaagatcgcccccagaagcttctggatgacgctgctgacggactct
ctaccgctactggaacagaacgaggtgatcttctctgcagatcagacctacgatttgatg
tattgtttagaggaactgacgtcctcactggaccctgcagctcctggtgcagatagacct
atgcaggaggaagacgtggagcagaccaaagtggagctcctcaggctctctctggccagg
aatctgtctaaggctatcgttaaagaaggaaccgtggacacatga
DBGET
integrated database retrieval system
