Cyprinodon variegatus (sheepshead minnow): 107103332
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Entry
107103332 CDS
T06110
Name
(RefSeq) elongation factor 1-alpha 1
KO
K03231
elongation factor 1-alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107103332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107103332
03016 Transfer RNA biogenesis [BR:
cvg03016
]
107103332
03012 Translation factors [BR:
cvg03012
]
107103332
04131 Membrane trafficking [BR:
cvg04131
]
107103332
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107103332
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107103332
Transfer RNA biogenesis [BR:
cvg03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107103332
Translation factors [BR:
cvg03012
]
Eukaryotic type
Elongation factors
107103332
Membrane trafficking [BR:
cvg04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
107103332
Exosome [BR:
cvg04147
]
Exosomal proteins
Proteins found in most exosomes
107103332
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
107103332
NCBI-ProteinID:
XP_015258482
Ensembl:
ENSCVAG00000002957
UniProt:
A0A3Q2CAR4
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEPSPNMTWFKGWKISRKDGNASGTTLLEALDAIQPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFAPVNVTTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDIRRGNVAGDSRNDPPQEAAGFTSQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKGVEKKAPTSGKITKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagagaagctccacataaacattgtggtcataggacatgtggactctggcaag
tccacaaccacaggccacctcatctacaagtgtgggggcattgacaaaagaacgattgag
aagtttgaaaaggaagcagcagagatgggaaagggatccttcaagtatgcttgggttttg
gacaaactcaaggcagagcgtgaacgtgggatcaccattgatatctctctgtggaaattt
gaaaccagcaagtattatgtgaccatcattgatgctccaggccacagggacttcatcaag
aacatgatcactgggacatctcaggccgactgtgcggtgttgattgtggctgcaggtgtg
ggcgagttcgaagctggtatctcaaagaacgggcaaactcgtgagcatgctttacttgcc
tacacgctgggagtgaagcagctcatcgtaggtgtcaacaagatggattcaactgagcct
aactacagccagaagcgctatgaagagattgtgaaggaagtcagcacttacatcaagaag
attggctacaatcctgacactgtggcctttgtacccatttcaggctggaatggagacaac
atgttggagcccagtcctaatatgacatggttcaagggctggaaaatcagtcggaaagat
ggcaatgcctcaggcactacactgctggaggccctcgatgccatccagccaccaacccga
cctactgacaagcctcttcgtctgcctctgcaagacgtatacaaaattggaggtattggc
actgtgcctgtgggccgagtggaaacaggaatcctaaaacccggtatggtggtaacattt
gctcctgtcaatgtaaccactgaagtcaaatcagtggagatgcaccatgaagccctgagt
gaagcgttgccaggggacaacgtgggatttaatgttaagaatgtctcagtgaaggacatt
cgcagaggcaatgtggctggagacagcagaaacgacccgccgcaggaggcagctggcttc
acctcccaggtgattatcctgaaccatcccggtcagatcagtgccggctatgcccctgtc
cttgactgtcacactgcacatatcgcttgcaagtttgccgagctaaaggaaaagatagac
cgtcgttctggaaagaagctggaggataaccccaagttcctgaagtctggggatgctgct
atagtggacatgattcctggcaagcctatgtgtgtggagagcttctctgagtacccaccg
cttggccgttttgcggtgcgtgacatgcgtcaaacagtggcagtgggcgtgataaaaggt
gtggaaaagaaagctcccacgagtggcaagataaccaagtctgctcagaaggcgcagaag
accaaatga
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