Cyprinodon variegatus (sheepshead minnow): 107103378
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Entry
107103378 CDS
T06110
Name
(RefSeq) collagen alpha-1(X) chain-like
KO
K03988
complement C1q subcomponent subunit C
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107103378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107103378
Membrane trafficking [BR:
cvg04131
]
Endocytosis
Phagocytosis
Opsonins
107103378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C1q
Collagen
Motif
Other DBs
NCBI-GeneID:
107103378
NCBI-ProteinID:
XP_015258556
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MGAYVGFAVLFGVASLLSAVECNVNCKGLDGRPGEGGSGGRDGLPGMKGQKGEPAHRLDG
PEDPVILLRLKGDKGDPGPPGPIGPKGYPGEVGAPGKDGLPGPPGQAGGNVDSGQQSSSQ
DKHSAFSVIRTDSTYPALTKKITFQTAVVNKYNDIDKDTGIFTCRVAGFYYFTFHAVSKV
NMCLGLVREGAEESQVFCNYNTKNSEQANAGLNARVNLLSGKKHSAPVADLPIPVFCGKC
QSSSTVPGSEHKTH
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgggagcttatgttggattcgcagttctgttcggcgtggcttcgttgctgtcggccgtc
gaatgcaatgtgaactgtaaggggctggatggtcgtccgggagaaggaggatctggtgga
cgtgatggattgcctgggatgaaagggcagaagggagagccagctcacaggttggatggc
ccagaagacccagtcatcctgctaagactgaaaggggacaaaggggacccggggccacca
gggccaattggtcctaaaggttaccccggtgaagtaggagcaccaggaaaggacggtctg
cctggccctcctgggcaagctgggggaaacgttgactccggtcagcagtcgtccagtcag
gacaaacattctgctttctctgtgatcaggactgatagcacatacccggctctgaccaag
aaaataacttttcagactgcagtcgtcaacaaatacaacgacatcgacaaagacaccgga
atcttcacctgcagagttgctggtttttattattttaccttccacgctgtttccaaggtg
aacatgtgccttggtttagtcagggaaggagcagaagaatctcaagttttctgtaattac
aacaccaagaactctgaacaagcaaacgctggtctaaatgcaagggtgaacctgctctca
ggtaaaaagcacagtgcaccagtggcagacttgccaattccggtgttctgtggcaaatgc
cagtcgagctccacagtgccgggcagtgagcacaagacacactag
DBGET
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