Cyprinodon variegatus (sheepshead minnow): 107103387
Help
Entry
107103387 CDS
T06110
Name
(RefSeq) phosphofurin acidic cluster sorting protein 1-like
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107103387
Membrane trafficking [BR:
cvg04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
107103387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
107103387
NCBI-ProteinID:
XP_015258567
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MAAAADRGGFLGVAVPSCPAAAAEPSEGSEADRPTDCRVAVPMNLYATWEVERSSPSCVP
RLCSLTLKKLMLFRELDQDLTSFIIAVKIQGSKRTLRSSEYLLPPGSLVETDLELTFSLQ
YPHFLKRDTNRLHVMLQRRKKYKNRTILGYKSLAVGVINMDEVMQHPTDGAQILGLHSNQ
KDASVRAAELSVHSLSSQPVEQEDVCSHHGNKTKASDRSPDTEHYWEDDDDSFFSDQEGS
DDALPPQEMQNEDDDIHRKIKRSHRKILQTASLAQHPNLKQKLVALLKRFRITDESDPVG
QTQDAESDQDLDLLYGSIEVDNMSDSGRDIYDLESIQSTPKPKLRPFFESNSQIEMRSLE
HQKEQTAAVEPLSAGVPRSNCTEGPREDEEVEDGALATDAGSAAKTELQTHISPSKTGSQ
HPTRTVSLKDRQHSRGMDRNSSVDSETSCDHRIPAPQVARKVVLDQLNSILLSEDQVPDS
IILINTTDWQGQYLSELLFDQPIVCSVSSADVQAAFSTIIARLQRFCNYNSQTPPTVKVG
VAGDQSYLNTVLNCFVDQLANKTPDWLHYLCFLIIPYGVHPLAKYLSVLDGKFGSLFLDA
GWRELFGRAEPPLLDPLGVSARVCEYVAGAAVSHLCPISEAMLTCKHRSPEDDSFQKFVP
FIGVVNVGLVEQNFLSTSVDSDDFILGSPPCQSGVGLTSTPPPSPSISSSAEMMGLQVDY
WTHSGGGGGGGAAEWRKEVGMKNSLKNNFRCLQVSRLSAGELMSMTVVMKEKNKKVMFLS
KKAKEKEVESRSQVIEGISRLICTSKHQHTLRVSVDGVEWNDVKFFQLAAQWPTHVKHFP
VGIFGYSKL
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggctgcggaccgtggaggatttctgggagtggcggttccttcgtgtccggct
gcagctgccgaaccttcggaaggatccgaagctgatagaccgaccgactgtcgggtcgcg
gttcctatgaacctttacgcgacctgggaggtggagcggtcctctccgagctgcgtgccc
aggctctgcagtctgactcttaagaagttgatgttgttcagggagctggaccaagacctc
acctcgttcatcattgctgtgaagatccagggttcaaagcggactttgagatccagcgag
taccttcttcctcctgggagcctggtggaaacagatctggagctcaccttctccctgcag
tatccccacttcttgaagagagacaccaatcgtctgcatgtgatgctgcagaggaggaag
aagtacaaaaaccgcaccatcctgggctacaaatcactcgctgtgggtgtcatcaacatg
gacgaggtgatgcagcatccaacggatggagcccaaatccttggtctccatagcaaccag
aaggatgcttcagtgcgagcagcagaactgagcgtccattctttgtctagccagccggtc
gagcaagaggatgtgtgtagtcaccatggcaacaagactaaagcttcagatcgttctcct
gacacggaacattactgggaggacgacgatgacagtttcttctcagatcaagaaggaagt
gatgatgctctcccgcctcaggagatgcagaatgaggacgatgacatccatagaaagata
aagagatctcacagaaaaatcctgcagacagcatcgctggcccagcatccaaaccttaaa
cagaagctggttgctctgttgaagagatttaggatcactgatgagagtgaccctgttggt
cagactcaggatgctgagtctgaccaggatcttgatctactgtacggcagcattgaggtt
gataacatgagtgacagcggccgggacatttatgaccttgagagcatccagagcaccccc
aaacccaaactcaggccattctttgaaagcaactctcagattgaaatgaggagtttggag
catcagaaagaacaaacagctgctgtggagcccctgtctgctggagttcccaggtccaac
tgcactgaggggcccagagaagatgaggaagtggaggatggcgccttggcaacagatgca
ggctctgcagccaaaacagagctgcagacacacatctccccaagtaagacaggaagtcaa
catccaacaaggaccgtctccctgaaggaccgtcagcactccagagggatggacaggaac
agcagtgtggacagtgagacgtcatgtgaccataggatacctgctccgcaggtggcccgt
aaggtggttttggatcaactcaacagcattctgctctcagaggatcaggtaccagactcc
atcatcctgatcaacaccacagactggcaaggtcagtacctgtcagagcttctctttgat
cagccaatcgtgtgcagcgtctcatccgctgatgttcaggctgccttcagcacaatcatc
gcccgcctccagagattctgtaactataactcccagactccacccacagtgaaggtgggg
gtggccggagaccagagttacctcaacaccgtcctgaactgctttgtggatcagctggcc
aataagacgcctgattggctgcattacctctgtttccttatcatcccttacggggtccac
cctttagcaaagtatctgtcggttctggacgggaagtttggcagccttttcctggacgca
ggatggagggagttgtttggacgagccgagcctccactgctggatcctctgggagtatct
gctcgggtgtgtgagtatgtggcaggagctgcagtatcccacctctgtccgatctcagag
gccatgctgacctgcaaacacaggagccctgaagacgactcgtttcagaagtttgttcca
tttatcggggtggtgaacgttggcctcgttgaacagaacttcttgtcgacctcagtggac
tcagatgacttcatactgggatctcctccctgccagtctggggttggactcacctccaca
cccccaccgtccccctccatcagctcttcagcagagatgatgggtctgcaggtggactac
tggacacattctggaggaggaggaggaggaggtgcagctgagtggagaaaggaggtgggg
atgaagaacagtctgaagaacaacttccgctgccttcaggtgtcccgtctgagtgcagga
gaactgatgagtatgacggtggtgatgaaggagaagaataagaaagtcatgttcctcagc
aaaaaggccaaggagaaggaggtggagtcgaggagtcaggtgatcgagggaatcagcagg
ttgatctgtacgtccaaacaccagcacacactcagagtgtctgttgatggtgtcgagtgg
aacgacgtgaagtttttccagctggcagctcagtggccgacgcacgtcaagcactttcct
gtcgggatcttcggctacagcaaactgtga
DBGET
integrated database retrieval system
